Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0634 ATGTTCCTTCGTAGAAGGCAAAACCAGAATCAGCTGGAGAGCGATCCGTCACATAAAGATGCAAAGGTAGATGAACTCAGGGCTGCTCTGGGGCCTCTATTTGGGCGTAGTTTAAAGTATTGCACAGACGCATGCCTAAGGAGGTATCTGGAAGGAAGGAATTGGAACGTGGAGAAAGCCAAGAAAATGTTAGAAGAATCACTGAAATGGAGATCAACTTATAAGCCAGAGGAAATTTGTTGGCCTGAAGTAGCACACGAAGGTGAGACAGGCAAAGTCTCCAGAGCAAACTTTCATGACCGATCTGGGAGGACTGTGCTTATAATGAGGCCAGGAAAGCAGAACACAAATTCGCCAGAAGATAATATACGGCATTTAGTGTACCTGATGGAAAATGCTATCCTCAATCTTCCCGAAGGTCAAGAACAGATGTCGTGGCTCATAGACTTCACCGGATTTTCGCTCAACACTAACGTTTCAGTCAAAACAGCCCGTGACATTGTTAACATTTTACAAAACCACTATCCTGAAAGGCTTGGTATTGCTTTTCTGTATAGCCCACCAAGAATATTTCAGGCTTTTTGGAAGGCTGTGAGATACTTTCTGGATCCCAAGACATTCCAGAAGGTGAAGTTCGTGTATCCTAAAGATAAGGAGAGTGAGGAGCTGATGAAATCGCTGTTTGACGTGGAAAATCTGCCAAGTGAGTTTGGTGGTAAAGCCACATTGAAGTACGACCACGAAGAGTTCTCGCGTTTGATGGCAGCGGATGATCTCAAAACTGCTAAGTTCTGGGGCCTCGATGACAAGCCTTTAACCACTATGAATGGCCATTCTGGTGCTGAGGTGGTTCCAGAACCCGTGCCCACTTGA 873 0.4525 MFLRRRQNQNQLESDPSHKDAKVDELRAALGPLFGRSLKYCTDACLRRYLEGRNWNVEKAKKMLEESLKWRSTYKPEEICWPEVAHEGETGKVSRANFHDRSGRTVLIMRPGKQNTNSPEDNIRHLVYLMENAILNLPEGQEQMSWLIDFTGFSLNTNVSVKTARDIVNILQNHYPERLGIAFLYSPPRIFQAFWKAVRYFLDPKTFQKVKFVYPKDKESEELMKSLFDVENLPSEFGGKATLKYDHEEFSRLMAADDLKTAKFWGLDDKPLTTMNGHSGAEVVPEPVPT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0634 290 PANTHER GH16843P 7 270 - -
Dere13g0634 290 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Dere13g0634 290 SMART sec14_4 87 242 IPR001251 -
Dere13g0634 290 CDD SEC14 99 240 IPR001251 -
Dere13g0634 290 FunFam Phosphatidylinositol transfer protein 3 2 274 - -
Dere13g0634 290 SUPERFAMILY CRAL/TRIO domain 81 253 IPR036865 -
Dere13g0634 290 SUPERFAMILY CRAL/TRIO N-terminal domain 10 82 IPR036273 -
Dere13g0634 290 Gene3D - 3 268 IPR036865 -
Dere13g0634 290 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Dere13g0634 290 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Dere13g0634 290 Pfam CRAL/TRIO domain 94 239 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0634 Dere-ChrDere13 7958668 7960189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0634 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 26.316 9.16e-11 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0634 13 7958668 7960189 Dere13g0634 13 7958668 7960189 ECH