Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0618 ATGCCTTCTGGCTATCTATCAAAGCTGAATGCTACTATTTACTGTCGCTTTCGAGAAGCAATAACTCAGCAACATGGAGTGCCATCTTTGTTATACAGACATTCATCTCTGTCTCTTTCATCACTACATTCAACTTCATTTTTATTCGATGCCAATCTTTCTTCTTCAAGCCACACGCTTAGAAATAAATTAATGGCTGCTTCCACTTCCAAATCTGTACTGGGAGATGTTTGTGTAGATGATATCGTCACAAGCTGTAGCAGTACACTAGACTTCAGAAAGCCTGGTGGTGTTTACTTCAATGACAGAACTCGTAAAGCTTGCTTAAGAGCTAATTTGAATCTAAGAAGAAAAGATCCATTAAATGGTCCTCTTAATGTTGGGTATTCTACTTTTGATGCTACTTCAAGTTTCCCTTATCGACCATGGCTGAAGAATTTCTCTACCACTTTTTCTACTTCCTACTTTGCTCGGGCAGCACACAATTTCTCATTTGACAGCAGCACTTGTGATGAACAACTTGCGAATTCCTCCTCTTCACCAGACCAAACTACTGTTGGTGGCAAGACTTTGAAGCTGTTTTCAGGATCTAGTTACCTACCCCATCCAGATAAGGAAGAGACAGGTGGAGAAGATGCTCATTTTATTTGCACTGATGAACATGCAATTGGTGTTGCAGATGGTGTAGGTGGTTGGGCAGACGTTGGTGTTAATGCAGGACTGTTTGCTCGTGAACTTATGTTGAATTCTGTTAGAGCAATTCAAGAAGAACCAAAAGGTTCTGTTAACCCAGCAAGGGTGTTAGAGAAGGCTCACTCAACTGCGAAGGCTAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATAAGGAGCTACATGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGGCTTCAATTTTACTTATCAATTGGAGAGTGGCAATGGAGGTGATTTACCCAGCTCTGGCCAGGTTTTTACAGTACCTGTTGCCGGAGGAGATATTGTCATTGCTGGAACAGATGGATTATTTGACAACTTGTACAATAATGAAATTACTGCAGTTGTTGTCCACGCAGTTAGAGCCGGACTAGAACCCCAAGTAACTGCACAGAAGATAGCAGCACTGGCCCGTCAGCGAGCACAGGATAGAAATAGGCAGACTCCATTTTCTACTGCTGCCCAAGAGGCTGGTTTCCGTTATTATGGTGGCAAGCTCGACGACATCACTGTTGTTGTATCATACATAACATCCCCAGTCAACACTTAA 1320 0.4242 MPSGYLSKLNATIYCRFREAITQQHGVPSLLYRHSSLSLSSLHSTSFLFDANLSSSSHTLRNKLMAASTSKSVLGDVCVDDIVTSCSSTLDFRKPGGVYFNDRTRKACLRANLNLRRKDPLNGPLNVGYSTFDATSSFPYRPWLKNFSTTFSTSYFARAAHNFSFDSSTCDEQLANSSSSPDQTTVGGKTLKLFSGSSYLPHPDKEETGGEDAHFICTDEHAIGVADGVGGWADVGVNAGLFARELMLNSVRAIQEEPKGSVNPARVLEKAHSTAKAKGSSTACIIALTDKELHAINLGDSGFIVVRDGCTIFRSPVQQHGFNFTYQLESGNGGDLPSSGQVFTVPVAGGDIVIAGTDGLFDNLYNNEITAVVVHAVRAGLEPQVTAQKIAALARQRAQDRNRQTPFSTAAQEAGFRYYGGKLDDITVVVSYITSPVNT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0618 439 FunFam 5-azacytidine resistance protein azr1 202 327 - -
Dere13g0618 439 SUPERFAMILY PP2C-like 199 430 IPR036457 -
Dere13g0618 439 PANTHER PROTEIN PHOSPHATASE 2C 169 434 IPR039123 -
Dere13g0618 439 Gene3D - 336 437 IPR036457 -
Dere13g0618 439 SMART PP2C_SIG_2 193 433 IPR001932 -
Dere13g0618 439 SMART PP2C_4 184 431 IPR001932 -
Dere13g0618 439 ProSiteProfiles PPM-type phosphatase domain profile. 197 433 IPR001932 -
Dere13g0618 439 Gene3D - 204 323 IPR036457 -
Dere13g0618 439 Pfam Stage II sporulation protein E (SpoIIE) 221 431 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0618 Dere-ChrDere13 7764392 7767255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0865 09 11524371 11527445 Dere13g0618 13 7764392 7767255 CCT
Dere13g0618 13 7764392 7767255 Dere13g0618 13 7764392 7767255 ECH
Dere13g0618 13 7764392 7767255 Dere09g0865 09 11524371 11527445 ECH