Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0614 ATGCTCCAGACCAGAAGGCCTTTTGAGTCAAAAAAAAGTTACTCCTTCCTGCTAAGCGCACTGCCAGCTGCGGAAACCTCCAACCCCTCACCTCTTCCCATCCCTTCCTCCTCTGTCTCTCTCTCAGCCAGGAATATGATTAAACTATTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAGAATGCAAGTGGTGGAGCACCCATTAAGAAGCAAAGTGCTGGGGAGTTGCGTCTGCACAAAGATATAAGCGAGCTGAATCTACCAAAATCTTGTACCATGCAATTCCCCAACGGTAAAGATGACCTGATGAACTTTGAAGTTTCAATTCGGCCTGATGAAGGATATTATCTGGGTGGCACATTTTTGTTTTCCTTCCAAGTATCTCCCATCTATCCACACGAGGCACCAAAAGTTAAGTGCAAGACGAAGGTCTACCATCCGAATATTGACTTGGAAGGAAATGTTTGCCTCAACATCTTACGAGAAGACTGGAAACCTGTTCTCAATATAAACACAGTCATATATGGATTGTATCATCTTTTCACGGAGCCAAATTATGAGGACCCCCTTAATCATGATGCGGCGGCAGTTTTGAGAGAGAATCCAAAGATGTTTGAGTCTAATGTGAGGAGGGCTATGGCTGGTGGGTATGTGGGGCAAACCTTTTTCCCACGCTGTATGTAA 687 0.444 MLQTRRPFESKKSYSFLLSALPAAETSNPSPLPIPSSSVSLSARNMIKLFKVKEKQRELAENASGGAPIKKQSAGELRLHKDISELNLPKSCTMQFPNGKDDLMNFEVSIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMAGGYVGQTFFPRCM 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0614 228 CDD UBCc 78 212 IPR000608 -
Dere13g0614 228 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 146 161 IPR023313 -
Dere13g0614 228 SMART ubc_7 77 219 - -
Dere13g0614 228 Pfam Ubiquitin-conjugating enzyme 78 213 IPR000608 -
Dere13g0614 228 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 74 219 IPR000608 -
Dere13g0614 228 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 102 206 - -
Dere13g0614 228 SUPERFAMILY UBC-like 68 226 IPR016135 -
Dere13g0614 228 FunFam NEDD8-conjugating enzyme Ubc12 70 228 - -
Dere13g0614 228 Gene3D Ubiquitin Conjugating Enzyme 70 228 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0614 Dere-ChrDere13 7704751 7708506 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0614 13 7704751 7708506 Dere13g0614 13 7704751 7708506 ECH