Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0606 ATGCCTCCTCCCTCTTTCCTTCTTTTCTCTCTTCTCCTTCTCTTCTTCACAACCTCCATTGCCACCACTCTGCGCTTCAAACAAGCCCCTAAATTCTACAACTCCCCCACCTGCCCCACCATCCATCACCGTCCCGCCGCCGCCGCCGTTGTTTGCTCCGACGACGCAGTCCACGTGGCAATGACCCTCGACCTCTCCTACCTTCGTGGTTCCATGGCCGCCATCTTCTCCATACTCCAACACTCCTCCTGTCCCGAGAACATCATCTTCCATTTCGTCTCCGCCGCTTCTAAACCTTCTTCCGCCTCCATTCTCAACCACACTCTCTCCACTTCCTTCCCTTACCTCCAATTCCATATCTACCCCTTCGACGACACCTCCGTCTCCGGCCTAATCTCCACTTCCATACGCTCCGCATTGGATTGCCCTCTCAACTATGCCCGCAACTACCTCGCTAACCTCCTCCCGCCCTGTGTCTCCAAAGTCGTCTACCTCGACTCCGACTTAGTCCTCGTCGACGACATCGCCAAGCTCGCCGCCACGCCGCTCGGTTCAGATTCCGTCCTCGCCGCGCCGGAATACTGCAACGCCAATTTCACCTATTACTTTACGCCGTCGTTTTGGTCGAACCCTTCTCTGTCTCTCACTTTTGCGGGTCGAAAGCCTTGTTACTTTAACACCGGCGTGATGGTCATCGATTTGGAGCGATGGCGGGTCGGTGACTATACGAGGAAGATTGAGGAGTGGATGGAGCTGCAGAAGAGAATGCGGATCTACGAGCTGGGATCGTTGCCGCCCTTCTTGCTGGTGTTCGCCGGGAATATAGCTCCGGTGGATCACAGGTGGAACCAGCACGGGCTTGGAGGCGACAACTTCCGTGGCCTCTGTCGGAATCTGCATCCGGGCCCGGCGAGCCTTCTGCATTGGAGTGGGAAGGGTAAGCCGTGGGCCCGATTGGACGCCAACAGGCCTTGCCCATTGGATGCCTTATGGGCTCCTTATGATCTACTCGATACGCCTTTCGCTCTCGAGGCTTAA 1038 0.5645 MPPPSFLLFSLLLLFFTTSIATTLRFKQAPKFYNSPTCPTIHHRPAAAAVVCSDDAVHVAMTLDLSYLRGSMAAIFSILQHSSCPENIIFHFVSAASKPSSASILNHTLSTSFPYLQFHIYPFDDTSVSGLISTSIRSALDCPLNYARNYLANLLPPCVSKVVYLDSDLVLVDDIAKLAATPLGSDSVLAAPEYCNANFTYYFTPSFWSNPSLSLTFAGRKPCYFNTGVMVIDLERWRVGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRNLHPGPASLLHWSGKGKPWARLDANRPCPLDALWAPYDLLDTPFALEA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0606 345 Pfam Glycosyl transferase family 8 58 318 IPR002495 GO:0016757
Dere13g0606 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 337 IPR029044 -
Dere13g0606 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 338 - -
Dere13g0606 345 FunFam Hexosyltransferase 58 325 - -
Dere13g0606 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 58 324 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0606 Dere-ChrDere13 7526723 7527760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0606 5 343 Glycosyltransferase AT3G50760 70.468 0.0 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0606 13 7526723 7527760 Dere13g0606 13 7526723 7527760 ECH