Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0569 ATGGAAGGAAAGCATTTTGTGATGGTGCATGGGGTGTGCCACGGCGCTTGGTGTTGGTACAAGCTCAAGCCACTGCTTCAGTCTGCTGGTCACAAGGTCACAGTACTGGACCTTGCAGCTTCCGGCATCAACCCAAAGAGACTAGAAGATGTTGACACTTTCTCGGAGTACTCTGAGCCTCTCTTGGAGTTCATGGAATCACTGCCTTCGAACGAAAAGGTTGTTCTTGTGGGACACAGCTTTGGAGGCTTGAGTATAGCTCTTGCCATGGACAAGTTCCCACAAAAGATAGCAGTTGGAGTTTTTTTAGCAGCTTTTATGCCCGACACACATCACAAACCATCCTATGTCATAGTACAACTGTTCGCGGAGGCACCCCATGAATTGTTTGACATTAAGATTTCGTCCTCTGGGAGTAAAACATCAATGATTTTTAGGCCAAAGACTTTGTCCACCAAACTTTATCATCTCAGTCCCACTGAGGTACTCATAGCTGTCTGCCTTCTTTTCAATTGTTTTGGGATTTGGAAGGCATGCAGAAGTATCACGCAAAGTTGCGAACTGTGTTAA 570 0.4579 MEGKHFVMVHGVCHGAWCWYKLKPLLQSAGHKVTVLDLAASGINPKRLEDVDTFSEYSEPLLEFMESLPSNEKVVLVGHSFGGLSIALAMDKFPQKIAVGVFLAAFMPDTHHKPSYVIVQLFAEAPHELFDIKISSSGSKTSMIFRPKTLSTKLYHLSPTEVLIAVCLLFNCFGIWKACRSITQSCELC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0569 189 Pfam alpha/beta hydrolase fold 5 116 IPR000073 -
Dere13g0569 189 PANTHER METHYLESTERASE FAMILY MEMBER 4 163 IPR045889 -
Dere13g0569 189 Gene3D alpha/beta hydrolase 2 182 IPR029058 -
Dere13g0569 189 SUPERFAMILY alpha/beta-Hydrolases 3 158 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0569 Dere-ChrDere13 7143777 7144432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0569 1 182 Miscellaneous Gene Families AT5G10300 49.738 7.83e-57 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0797 09 10873361 10876384 Dere13g0569 13 7143777 7144432 CCT
Dere13g0569 13 7143777 7144432 Dere13g0569 13 7143777 7144432 ECH