Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0490 ATGCCATACTCAGACCTCAAATCCATCTCCGATATGCTTCGAAAATGCTCTTCGCCATGCAATTTCCTCATCTTCGGCCTCACCCACGAGACCCTCCTCTGGAAAGCTCTGAATCACAAGGGCAGAACAGTGTTCATAGATGAAAACCGTTATTACGCTGCGTATTTCGAAGAGTTGCACCCTGAAATCGATGCCTACGATGTGCAGTACACAACCAAAAAGAGTGAAATGAAGGAGCTTATAGATTCAGCGAAAGAGCAGATAAAGAATGAGTGTAGGCCAGTACAGAATCTGCTATTCTTGGAATGTAAGTTAGGACTCAATGACCTTCCGAATCATGCGTACGAGGTGGACTGGGATGTGATATTGGTGGAAGGGCCACGTGGCGACTGGCCCGACGCCCCGGGGAGATGTCGGCGATATTTACGGCGGGCGATGGATGAGAGCAGTGCTCAGTATTGCAAGAATCAGTCATCATCATCAATGGCTTCTTCATCTTCTCAATCTTCGTGGTCATTATCGTCATCCTGA 531 0.4765 MPYSDLKSISDMLRKCSSPCNFLIFGLTHETLLWKALNHKGRTVFIDENRYYAAYFEELHPEIDAYDVQYTTKKSEMKELIDSAKEQIKNECRPVQNLLFLECKLGLNDLPNHAYEVDWDVILVEGPRGDWPDAPGRCRRYLRRAMDESSAQYCKNQSSSSMASSSSQSSWSLSSS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0490 176 PANTHER OS11G0490100 PROTEIN 3 139 IPR006514 GO:0045492
Dere13g0490 176 MobiDBLite consensus disorder prediction 153 176 - -
Dere13g0490 176 Pfam Polysaccharide biosynthesis 5 140 - -
Dere13g0490 176 NCBIfam TIGR01627 domain 2 138 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0490 Dere-ChrDere13 6186168 6186852 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0700 09 9716896 9717834 Dere13g0490 13 6186168 6186852 CCT
Dere09g0700 09 9716896 9717834 Dere13g0490 13 6186168 6186852 ECH
Dere13g0490 13 6186168 6186852 Dere13g0490 13 6186168 6186852 ECH