Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0480 ATGGATGCGGGAGCAGCCGGCGCCGCCGCCGCCGCCGAGAGTCTCTCTCCGGCGGCCTCCATATCGCGGTGGAAATTCGCCGTGTCCCGGCAGTATCAGCATCTACTGGATAAAACGACGCCGCACATCCTCCAACGTTGGATCGCCTGCTTAGTCGTCGCCTTCATCTACGTCGTGCGCGTCTACATCGTCCAAGGGTTCTACATCGTCTCTTATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGGTTTCTCTCCCCTCAGGTGGACCCTGAGATCCAGGAACTCTCTGACGGTCCCTCCCTTCCCACCAGGGGGTCCGATGAATTCCGTCCTTTCGTTCGCCGGCTCCCGGAGTTCAAGTTCTGGTACTCAATCACAAAGGCATTTTGCATTGCGTTTGTGATGACTTTCTTTAGTGCTTTCGATGTACCAGTGTTCTGGCCAATACTTCTCTTCTACTGGGTAGTCCTATTCTCACTTACCATGAGGAGACAGATATCTCACATGATCAAATATAGATATGTGCCATTCACATTTGGGAAACAGCGCTATGATGGAAAGAGATCATCATCAGAGAGCACGACCCTTCCTATGGACTGA 606 0.5231 MDAGAAGAAAAAESLSPAASISRWKFAVSRQYQHLLDKTTPHILQRWIACLVVAFIYVVRVYIVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELSDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTFGKQRYDGKRSSSESTTLPMD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0480 201 PIRSF AtER_Rer1p 8 197 IPR004932 GO:0016020
Dere13g0480 201 PANTHER PROTEIN RER1 12 193 IPR004932 GO:0016020
Dere13g0480 201 Pfam Rer1 family 26 186 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0480 Dere-ChrDere13 6127392 6129676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0480 10 194 Miscellaneous Gene Families AT4G39220 70.270 1.01e-96 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0480 13 6127392 6129676 Dere13g0480 13 6127392 6129676 ECH