Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0316 ATGGAGGAAGCAACCTGTACGCATGGTTTCATCGACGTTAAGTTGCACTGTTTTGGTGTTCGATGTTCTCGTTCTGCTGTAGCTTTCTATGAATTTCTTCTTCTATCGGGCTGCTACTTGTCGCTCTTGATGGCAGATTTACCAGGTTATGTTCGTTCCTGCTTGAACACGGGGAAACTTGCCCTATTGGCAATTTTGGTTTCGGGTGGGATTGTCTTGCAAATTTTGGCATGTGCATTGTATGATAATTGGTGGCCGATGTTGTCTGCCATAATGTATGTTATTCTTCCCATGCCCTTGCTGTTCTTCGCCGGATCTGATGGCTATTCTTTACTTTCTGAATCTGAAAGCAGTTGGGTGAATGCAACCAAGTTCTTGACTGGTGCCTCGGTTATGGGAAGCATAGCCATACCAGCCATATTAAAGCATGCTGGGGTTATTGGTTGGGGAGCACTCGCAATGGACCTCTCCTCCTTCTTTGTGTTTGTATTCGCCATAATGTGTTACATACGGATGAGTGACGATAATGATTAA 534 0.4457 MEEATCTHGFIDVKLHCFGVRCSRSAVAFYEFLLLSGCYLSLLMADLPGYVRSCLNTGKLALLAILVSGGIVLQILACALYDNWWPMLSAIMYVILPMPLLFFAGSDGYSLLSESESSWVNATKFLTGASVMGSIAIPAILKHAGVIGWGALAMDLSSFFVFVFAIMCYIRMSDDND 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0316 177 PANTHER LEPTIN RECEPTOR-RELATED 58 174 IPR007262 -
Dere13g0316 177 Pfam Vacuolar protein sorting 55 61 176 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0316 Dere-ChrDere13 4355735 4358193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0316 44 177 EF-hand Containing Proteins AT1G32410 71.642 7.63e-68 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0503 09 7933632 7934044 Dere13g0316 13 4355735 4358193 CCT