Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0218 ATGTCTTCAAAAGCCACAGCCTTGTTGTTCATCTTCATGATTTTCACGTTGAATGCTCTTCCACTAACATATGCTTGTGGTCCTTGCACTCAGCCACATCCACCATACTACCGACCGGGTCACCCCAAAACCCGGCACCCGAAACCCCACCCGCCGCATCACGGCAGTCACCCCAAAGTGACGCCACCACTGCCACCTGTCGTTGTCCCGCCCATCATTGTTACCCCTCCACTGCTGCCCCCTCCGGTGACATACCCACCACCAACTGCACCTTCCCCACCGTACTGGGGTGTTCCTCCGGTTCTTCCTCCTCCTCTTCCGCAAGTGACGTGTCCCATCGATGCCTTAAAGCTAGGGCTGTGTTTGGATGTGCTTGGAGGTCTTGTGCATGTGGGAATAGGAAACCCAATTGAGAATATATGCTGTCCCGTGATCCAAGGATTGCTTGAGCTGGAAGCAGCCATTTGTCTTTGCACTATTATTAGGCTTAAGCTTCTTAACCTCAACGTATTCATTCCTCTTGCTCTTCAAGTCCTTATAACTTGCGGGAAGACTCCTCCTCCTGGTTTTGTCTGTCCACCTCTATACTGA 591 0.5178 MSSKATALLFIFMIFTLNALPLTYACGPCTQPHPPYYRPGHPKTRHPKPHPPHHGSHPKVTPPLPPVVVPPIIVTPPLLPPPVTYPPPTAPSPPYWGVPPVLPPPLPQVTCPIDALKLGLCLDVLGGLVHVGIGNPIENICCPVIQGLLELEAAICLCTIIRLKLLNLNVFIPLALQVLITCGKTPPPGFVCPPLY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0218 196 Pfam Hydrophobic seed protein 110 193 IPR027923 -
Dere13g0218 196 CDD HPS_like 110 192 IPR027923 -
Dere13g0218 196 MobiDBLite consensus disorder prediction 39 55 - -
Dere13g0218 196 MobiDBLite consensus disorder prediction 36 60 - -
Dere13g0218 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 113 194 IPR036312 -
Dere13g0218 196 PANTHER - 6 192 - -
Dere13g0218 196 Gene3D - 109 194 IPR036312 -
Dere13g0218 196 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Dere13g0218 196 SMART aai_6 111 192 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0218 Dere-ChrDere13 3264025 3264615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0218 110 194 Acyl Lipid Metabolism Gene Families AT4G22490 35.294 1.49e-09 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0218 13 3264025 3264615 Dere13g0218 13 3264025 3264615 ECH