Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0217 ATGGCTTCCAAAACTTCTTCTTCTCTTGCTCTTTTCCTAGCTCTCAATCTCCTCTTCTTCGCACTTGCGAGTGCATGTGGATCGTGCCCAGGCTACGTCCCACAGCCCAAGCCTAACCCTAACCCAAACTACCCAAGCCCTTCAGGCGCCTCATGCCCTCGTGATGCACTAAAACTAGGGGTATGTGCTAATGTGCTGAACGGCTTGCTTAACATCACCCTTGGGAAGCCACCAGTGACCCCTTGCTGCTCTCTCATTCAAGGCCTTGCTGACCTTGAAGCCGCAGTATGCCTCTGCACTGCCCTTAAAGCCAACATTTTGGGGATCAACCTCAATATTCCTATCTCACTCAGCTTGCTTCTCAATGTTTGCTCTTACAAGGTTCCTCGCGATTTCCAATGTGCTTGA 408 0.5049 MASKTSSSLALFLALNLLFFALASACGSCPGYVPQPKPNPNPNYPSPSGASCPRDALKLGVCANVLNGLLNITLGKPPVTPCCSLIQGLADLEAAVCLCTALKANILGINLNIPISLSLLLNVCSYKVPRDFQCA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0217 135 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 134 IPR036312 -
Dere13g0217 135 CDD HPS_like 49 134 IPR027923 -
Dere13g0217 135 Gene3D - 50 135 IPR036312 -
Dere13g0217 135 FunFam pEARLI1-like lipid transfer protein 1 50 135 - -
Dere13g0217 135 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Dere13g0217 135 SMART aai_6 52 134 IPR016140 -
Dere13g0217 135 Pfam Hydrophobic seed protein 52 135 IPR027923 -
Dere13g0217 135 PANTHER - 6 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0217 Dere-ChrDere13 3260593 3261000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0217 1 134 Acyl Lipid Metabolism Gene Families AT4G22520 32.353 7.92e-14 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0217 13 3260593 3261000 Dere13g0217 13 3260593 3261000 ECH