Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0214 ATGCGGGTGAAAGAAATGCATCCTCTGTGTTGTATCTCACTGGAGAGTCCAGGAATCGGAAATCAATCTCCGGAGGCGTCGCTTTCCAGGACTAGGAGTCTGCCAGCGAGTTTCTTGGCGGTCGGATCTAACGACAATGCCGCTGGACGGGCTCAGGGATCGGACGCCACCGTGGCCGGAATCCTCTACAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGATGGTTCCTCTTGAGGAATGGCGTCCTCTCTTACGCGAAGCTCCGGTGGCCGGAGAATCTCAATCTCCTAACGCCGACCTATGACTTCAGATTGATTGGCGAAATCTCCACCAACCGATTAGCGAGGATAGACAGCGGGAGTACCATGCGACGGAAGCACCAGAAATCTGCCTCTGGCGTAGTCCATCTCAAGATTTCGTCATTTAGAGAGAGCAAATCAGATGATCGGCGGTTCTATATATTTACTGCTACCAAGACTCTCCATCTCAGAACTGATTCAAGGCAAGATCGCGTGGCGTGGATACAAGCGTTGGAATCAACTCGTAGCTTGCATCCACTTAGATCACTGAATGATAATATTTCCCTTGTGCCGAACGATATATCTATATCAACTGAGAGCCTAAAAAAGCGCTTGCTTGAAGAGGGAACCAATGAGAAGCTTGTGAAGGAGTGCGAGGAAATTATGCTCTCAGAATTCTCGAAAATGCAAGGGCAACTTAAAATTATTTATGAGGAGCGATTAAATTTGCTTGATACAATAAGGCAGTTGGAGGCGGCTAATATTGAACCTGAGGCCTCTGGAATCCATGATGGTGATTACCAGTTAACAAAGCATGAATTTTCAAGTTTAAGACGTGGAAAATACAGTGAATGCAGTACAACTGAATCATCTGAAGATATCGAGAGGCAGGAGATGGAAGAAGTGTCGGATGAAGATGAGATCTCATATTATGATACAATAGAGTACTTTGTAGACCCTGGTTTGAGGTGCGGGTCAACAGGACCTCTGGTTCCGGTGCACAAGTCTGGGGAAACTAATGAACAATGCTTTGATCGGGGAAAAAGTCAGCCTGAGAAGGCAGTCTATAATTCTAGTTATCCTCAGATAGCAAGACGAAGAAAACTTCCTGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGAAAGGATCTCTCACGTGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCGTCCCTTCAGAAATGTTGTGAGGACCTCGAATACTCTTACCTTCTGGACCGAGCTTATCAGTATGGAAAATCAGGAGACAGTCTCCTTCGCGCATTGAATGTTGCTGCCTTTGCAATTTCTGGATACGCATCATCTGAAGGTCGTCATTGTAAACCTTTTAACCCTTTGTTGGGGGAAACTTATGAAGCTGATTATCCTGAGAAAGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGTGACAGCAACATCCATTCAAAATTTTGGGGTAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATGTTTCAGTGGAGTAAGGTCACCACATCAATTTATAATCTCATCCTTGGCAAAATATACTGTGATCATCATGGGAACATGGACATACGTGGTAATCGCCAATATTCATGCAGACTTAAGTTTAAAGAGCAGTCTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGCTACGGGGAAGAAAGTTGCCACATTATTTGGCAAGTGGGACGATAGCATGTATTATATTAATGGTGATGGGAATGTCAAGCCAAAAGATTTCACTTCATCAAATGCATCTATATTGTGGAAAAGGACTGGGCCACCTACTTATCTTACTCGGTACAATTTGACATCATTCGCTATCACTCTGAACGAGCTTACTCCAGGATTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTTGAGAATGGGGAATATGAAAAGGCCAATTGGGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCAAGAAAAATACAAGAAAATGGTTGGAAGCCTAAATGGTTCCAAAGAGAAGGCGAAGATGGAACATTTCGTTATGTTGGCGGATATTGGGAAGCCAGAGAGCAAGGAAAATGGGATGGATGTCCATATATATTCGGTGAATTTAATGGAGATTTTGTCGTTCCTTAG 2292 0.4437 MRVKEMHPLCCISLESPGIGNQSPEASLSRTRSLPASFLAVGSNDNAAGRAQGSDATVAGILYKWTNYSKGWRSRWFLLRNGVLSYAKLRWPENLNLLTPTYDFRLIGEISTNRLARIDSGSTMRRKHQKSASGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRQDRVAWIQALESTRSLHPLRSLNDNISLVPNDISISTESLKKRLLEEGTNEKLVKECEEIMLSEFSKMQGQLKIIYEERLNLLDTIRQLEAANIEPEASGIHDGDYQLTKHEFSSLRRGKYSECSTTESSEDIERQEMEEVSDEDEISYYDTIEYFVDPGLRCGSTGPLVPVHKSGETNEQCFDRGKSQPEKAVYNSSYPQIARRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRVCLPVYFNEPISSLQKCCEDLEYSYLLDRAYQYGKSGDSLLRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEMFQWSKVTTSIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQSILDRNPHQVHGFVEDATGKKVATLFGKWDDSMYYINGDGNVKPKDFTSSNASILWKRTGPPTYLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANWEKQRLEKRQRMSRKIQENGWKPKWFQREGEDGTFRYVGGYWEAREQGKWDGCPYIFGEFNGDFVVP 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0214 763 Gene3D - 474 643 - -
Dere13g0214 763 Gene3D - 52 185 IPR011993 -
Dere13g0214 763 ProSiteProfiles PH domain profile. 55 184 IPR001849 -
Dere13g0214 763 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 645 - -
Dere13g0214 763 SMART PH_update 56 186 IPR001849 -
Dere13g0214 763 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Dere13g0214 763 SUPERFAMILY PH domain-like 54 181 - -
Dere13g0214 763 FunFam Oxysterol-binding protein-related protein 2A 684 755 - -
Dere13g0214 763 Pfam Pleckstrin homology domain 60 180 - -
Dere13g0214 763 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 741 IPR000648 GO:0008289
Dere13g0214 763 Gene3D - 684 744 - -
Dere13g0214 763 SUPERFAMILY Oxysterol-binding protein-like 383 757 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0214 Dere-ChrDere13 3219344 3229315 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0214 13 3219344 3229315 Dere13g0214 13 3219344 3229315 ECH