Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1639 ATGAGCTATGCACATTCCCATATGGGCTCTGGTAGTAGAACTGGTCGAAGTACTTTCGAGTTTGGAAAGACTCACGTGGTGAGGCCTAAAGGAAAACACCAAGCCACTATTGTGTGGTTACATGGTCTGGGTGATAATGGTTCCAGCTCATCTCAGCTTTTGGAATCTCTTCCTCTTCCAAATATAAAATGGATTTGCCCTACTGCTCCTACCCGTCCTGTAGCTGTACTTGGTGGTTTTCCTTGCACCGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCCGATGATTTGGAGGGTTTAGATGCCTCAGCAGCACACATTGCCAACTTATTGTCTACAGAGCCAGCTGATGTGAAAGTTGGTATTGGAGGCTTCAGCATGGGTGCAGCAACAGCCCTATACTCTGCGAGTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCATACTCAGTCAACCTTAGAGCAGTTGTTGGACTAAGTGGTTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATAGAAGTCTCACATGAAGCAAGAAGACGAGCAGCTTCATTGCCCATTTTACTGTGCCACGGAACTAGTGATGATGTAGTTCCCTTCAAATACGGAGAGAAATCAGCTCAATCCCTAAGCTCTGCAGGATTTCTATACATCACATTCAAATCCTATGATGGGATTGGTCATTATACAGTTCCTAGAGAGATGGATGAGGTTTGCAATTGGCTAAGCTCAAGGCTGGGGCTCGAGGGATAG 765 0.4614 MSYAHSHMGSGSRTGRSTFEFGKTHVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGELSEDGPDDLEGLDASAAHIANLLSTEPADVKVGIGGFSMGAATALYSASCFAMGRYGNGIPYSVNLRAVVGLSGWLPGSRSLRNKIEVSHEARRRAASLPILLCHGTSDDVVPFKYGEKSAQSLSSAGFLYITFKSYDGIGHYTVPREMDEVCNWLSSRLGLEG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1639 254 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Dere12g1639 254 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Dere12g1639 254 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Dere12g1639 254 MobiDBLite consensus disorder prediction 1 22 - -
Dere12g1639 254 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Dere12g1639 254 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1639 Dere-ChrDere12 28891163 28894867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1639 1 254 Acyl Lipid Metabolism Gene Families AT3G15650 75.000 1.19e-134 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1639 12 28891163 28894867 Dere11g1740 11 31199550 31202430 CCT
Dere11g1740 11 31199550 31202430 Dere12g1639 12 28891163 28894867 ECH
Dere12g1639 12 28891163 28894867 Dere12g1639 12 28891163 28894867 ECH