Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0183 ATGGGCGATTTCAATCTCGCTCTCGTGATCGTCGCCATAGTCGTGTGCATCATTGTCTTCATCTTCAATGTCTACCTGCTCGTCAATTACCAGCACCCCGACGACGCTAACCAGGCCTACTTCCCCAAATTCGTCGTTGTTTTGGGTCTCTCCATCGCCGCGATTTCCATCCTGATGTTACCGGCGGACGTGGCGAACCGGCAGGCGTGCCGGAACGCGATATACAATGGCGCGTGTCATCTCACCTTGCCGATGAAGGATCTGTGGCTGGCGGTCTACATCATCGACGCTGTGCTCGTGTTCTTTGTTATCCCCTTCTCGATGTTCTACTATGAGGGGGACCAGGACAAGAGTGTTGGCAAACGGATTAAGAGCGCGCTGTTGTGGATGGTGATGACAGCTATCGTGTGCGCTCTCGTTCTGGGTATCTTATATGGGCTGGTTGGGAAGGTGGACTTTACTGTTAGGCATCTCTCGTCATCCACAACCACATTTCCTAGCTCATGGGACTTCAATAGTGGTCAACAATGTATTGGAAATGGCGTCCATCAGTGCTCTGCCTACTCTGCTAGTGCATCATCAGAGAAAACATGGACCATGCGTACAACCTTTCCCGAATACGTTGTTGCACTCGCTACTATTGTTGGATCTGTGCTCTTTGCTATATTTGGTGGCGTTGGTATTGCTTGTCTGCCATTGGGACTTATATTTTCATTTATCCGTCGTCCAAAGGCTGTTATTACTCGCTCACAGTATATCAAGGAAGCAACTGAACTAGGTAAAAAAGCAAGAGAATTGAAGAAAGCAGCTGAGGCACTTCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAATTTCGTAAGAATATAAAAGCTGTAGAGAAGGAGGTGTTTCAATTAGAAGAAGATGTGAAACTTCTTGAAGAGATGTACCCACAAGGGGAAAAGGCTGAGACCGCATGGGCACTAACAGTTCTTGGATATCTGGCAAAACTTGTGTTGGGAATTTTAGGGTTGATCGTTTCAGTGGCATGGGTTGCTCATATCATCATATATCTTTTAATTGATCCTCCTCTTTCTCCTTTCCTGAATGAAGTTTTCATCAAGTTGGACGATATTTGGGGTCTTCTGGGTACTGCTGCATTCGCATTTTTCTGCTTCTACCTTCTCCTTGCCGTGATTGCGGGTGCCATGATGCTTGGGCTGAGACTAGTTTTCATTACTATTCATCCCATGAAGTGGGGAGCCACTTTGATGAACTCTTTTCTGTTTAATGTGGGACTTATCCTTCTCTGCTCCATTAGTGTTATCCAGTTCTGCTCCACAGCATTTGCTTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGCCACACTTTGCAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAGATTGCTTTTGTTGTGCTGGCTGGATTAACCTTTATATATTATGCTGCCTTTGGATGGAAAAGAAAAAAACCTAGTGGCAGGTTCCAATTGTCTACATGA 1530 0.4529 MGDFNLALVIVAIVVCIIVFIFNVYLLVNYQHPDDANQAYFPKFVVVLGLSIAAISILMLPADVANRQACRNAIYNGACHLTLPMKDLWLAVYIIDAVLVFFVIPFSMFYYEGDQDKSVGKRIKSALLWMVMTAIVCALVLGILYGLVGKVDFTVRHLSSSTTTFPSSWDFNSGQQCIGNGVHQCSAYSASASSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNIKAVEKEVFQLEEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFIYYAAFGWKRKKPSGRFQLST 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0183 509 Coils Coil 256 276 - -
Dere12g0183 509 Coils Coil 290 310 - -
Dere12g0183 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Dere12g0183 509 Pfam LMBR1-like membrane protein 9 287 IPR006876 -
Dere12g0183 509 Pfam LMBR1-like membrane protein 268 487 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0183 Dere-ChrDere12 3166013 3171701 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0183 12 3166013 3171701 Dere11g0181 11 3007181 3014374 CCT
Dere12g0183 12 3166013 3171701 Dere12g0183 12 3166013 3171701 ECH