Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0134 ATGGCTCTCGCATCTTCCAAAGTTTCTTCCTTTTTTCTCTCATCCATTGCTGGGGATACTCTGAAAAAGCCCATTTCTACTTCTTCTTCGTCTCTGAGCTTCGCTCTCTGTGTGCCTTCTTCTTCTTCTTCCTCTCTGTGTCTTGTTCCTAAGGCAGGAGGAAGCAGAAATTTCAGGGTTTACGCAGTGGCGGATACGAATTCCGTCGCGCTCACTGGCGTCATATTCGAGCCATTTGAGGAGGTGAAGAAGGATGTTCTCGCTGTTCCGATGTCGCCTCAAGTTTCCATGGCCCGTCAAAAATATACTGATGAGTGTGAAGCTGCAATTAACGAGCAGATAAATGTGGAATACAACGTTTCCTATGCGTACCACTCCATGTTTGCATACTTTGACAGGGACAACGTGGCTCTCAAAGGCCTTGCAAAGTTCTTCAAGGAATCAAGTGAAGAAGAAAGAGAACATGCTGAAAAGCTAATGAAATATCAGAATATTCGTGGTGGACGAGTGGTACTTCACCCCATCAAGAATCCCCCCTCTGAATTTGATCACGTGGAAAAGGGTGATGCATTGTATGCCATGGAGTTAGCTTTGTCTTTGGAGAAGTTAACAAACGAGAAACTTCTGAATGTGCACAGTGTGGCTGATCGCAACAATGATCCTCAAATGGCTGACTTCATTGAGAGCGAGTTCTTAGCTGAGCAGGTTGAAGCAATTAAGAAGATAGCAGAGTACGTGGCTCAACTGAGATTGGTTGGAAAGGGTCATGGTGTTTGGCACTTTGATCAAAGGCTTCGTCATGAGGGAGATGCAGCATGA 819 0.453 MALASSKVSSFFLSSIAGDTLKKPISTSSSSLSFALCVPSSSSSSLCLVPKAGGSRNFRVYAVADTNSVALTGVIFEPFEEVKKDVLAVPMSPQVSMARQKYTDECEAAINEQINVEYNVSYAYHSMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIKNPPSEFDHVEKGDALYAMELALSLEKLTNEKLLNVHSVADRNNDPQMADFIESEFLAEQVEAIKKIAEYVAQLRLVGKGHGVWHFDQRLRHEGDAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0134 272 ProSitePatterns Ferritin iron-binding regions signature 1. 151 169 IPR014034 -
Dere12g0134 272 Pfam Ferritin-like domain 108 251 IPR008331 GO:0008199
Dere12g0134 272 FunFam Ferritin 69 269 - -
Dere12g0134 272 ProSitePatterns Ferritin iron-binding regions signature 2. 220 240 IPR014034 -
Dere12g0134 272 SUPERFAMILY Ferritin-like 90 265 IPR009078 -
Dere12g0134 272 Gene3D - 68 269 IPR012347 -
Dere12g0134 272 ProSiteProfiles Ferritin-like diiron domain profile. 100 253 IPR009040 -
Dere12g0134 272 CDD Euk_Ferritin 104 263 - -
Dere12g0134 272 PANTHER FERRITIN 79 267 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0134 Dere-ChrDere12 1629831 1632484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0134 12 1629831 1632484 Dere11g0118 11 1830156 1832920 CCT
Dere12g0134 12 1629831 1632484 Dere12g0134 12 1629831 1632484 ECH