Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0125 ATGCCTTGCCTTTACATCTCCACCAACGTTAACTTAGACGGAATCGACACCGATCCCATCTTTTCTGAGGCTACCTCTGCCGTCTCCTCCATCATCGGAAAACCCAAAAAATTTGTGATGGTGATACTGAAGGGGTCAGTGCCTATATCATTCGAGGGGAACAAGGAACCAGCTGCTTATGCTGAGATAGTTTCCATGGGAGGCATAAACTCTGAAGTGAAGAGGAAGCTTATTGCTACGCTTGGCACCATCTTGCAGTCCAGACTCTCTGTCCCGAGAACCAGATTCTTTCTCAAAGTCTTTGACACAACTGTTTTTCGTAGTACCCCTAAACTTGCAGTTGAGACTCATGAGTTGAATTCTTTATTTCCCAGAATGATTGCTTGTTTTGGCAAATGGGTGCTGTATCCCGGATGGAGAAGCTTCGAACTTGCTGATTCGCCAGGGACTGAACTCAAAGGGTTTCCCGAGAGCGGAAGAAGAGCCGGTGAGAAGATGCCTTGCCTGAATCTCTCCACGAACGTCAACCTCGACGGTGTTGACATCTCTTCAGTACTCTCCGAAGCCACCTCCACTGTCGCCAAGCTCATCGGCAAACCTGAGTCTTATGTGATGGTTGTATTGAAAGGATCAATACCCATATCTTTTGGTGGGTCTGAGCAGCCTGCAGCCTATGGTGAATTGGTGTCCATTGGTGGTCTTAACCCTGATGTGAACAAGAAACTTAGTGCTGCAGTTGCGTCAATTCTTGAAACCAAGTTATCTGTGCCCAAATCACGGTTCTTCTTAAAATTCTATGACACTAAGGGTTCGAACTTTGGATGGAATGGGTCTACATTATAA 843 0.4626 MPCLYISTNVNLDGIDTDPIFSEATSAVSSIIGKPKKFVMVILKGSVPISFEGNKEPAAYAEIVSMGGINSEVKRKLIATLGTILQSRLSVPRTRFFLKVFDTTVFRSTPKLAVETHELNSLFPRMIACFGKWVLYPGWRSFELADSPGTELKGFPESGRRAGEKMPCLNLSTNVNLDGVDISSVLSEATSTVAKLIGKPESYVMVVLKGSIPISFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVASILETKLSVPKSRFFLKFYDTKGSNFGWNGSTL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0125 280 SUPERFAMILY Tautomerase/MIF 1 102 IPR014347 -
Dere12g0125 280 Gene3D Macrophage Migration Inhibitory Factor 167 280 IPR014347 -
Dere12g0125 280 FunFam Tautomerase/MIF superfamily protein 1 112 - -
Dere12g0125 280 SUPERFAMILY Tautomerase/MIF 166 280 IPR014347 -
Dere12g0125 280 Pfam Macrophage migration inhibitory factor (MIF) 2 103 IPR001398 -
Dere12g0125 280 Pfam Macrophage migration inhibitory factor (MIF) 167 280 IPR001398 -
Dere12g0125 280 Gene3D Macrophage Migration Inhibitory Factor 2 107 IPR014347 -
Dere12g0125 280 PANTHER D-DOPACHROME DECARBOXYLASE 166 279 IPR001398 -
Dere12g0125 280 FunFam Tautomerase/MIF superfamily protein 166 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0125 Dere-ChrDere12 1560984 1569383 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0125 12 1560984 1569383 Dere11g0103 11 1660566 1664263 CCT
Dere12g0125 12 1560984 1569383 Dere12g0125 12 1560984 1569383 ECH