Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0107 ATGGAAACTGCCACAGGCAAGCCCGGCTATCTCAGGAACGTTCTTATACGGTTGCTTCTGTTTGGGGTTTTCATCATAATTGTCCGGTTTGCTTACGTCGTAACCATCGCCGGCGAGTCTTGCAACGTCGGCGACTTCTGCTTCTTCTCATTCCCGGAGACACTCAACTTTGTTATCGCCGGGGCCGGTTCCGGAGCTCTGGCCGTTGCGTCCAATGACGCCGTCTCCATCGGATCTACCGCGCGGCCGGAGGTTTATGCGAGCAAGGATTGGTTCGAGGCCGTCCATTTCTACACCTCCGTGTTCCAAGATCTCATTTCCGATGGCTATCTCTCGCCGCAGTCGAAATCGCTCTGCGTCGAGACGCCGACCGGCCGCGACGTCTTGGCATTGAAGGAGATCGGCGTTTCGGACTCGATTGGGATTTCAAAGAAAGCTTCGAAGCCATTAGTGAAAGCAGGACAGGCTCATCGTATACCCTTTCGCGATAACACATTCGACTTCATTTTTTCCGGCGAGGGTGGGCTCGAGAAATCGGCGCGTCCGTCAGATTTCGCCTCTGAGATTGCTCGGACGCTGAAACCTGAAGGGTTTGTGGTGTTCCATATAAAGGCTAAAGATACGTATAGTTTCAATTCATTCCTTGATTTGTTCAATAATTTCAAAGTAGTGAAATCACATGATATAGATGGGTTTGATTCTTCAATGCCTCACATTCGAGAAATTGTTCTGAGGAAAGAGTATGATGGCATTGTTCATGAGTTTGAGCAATTCGATGATGATTCTAATGGAAAATGTTCTTCTCATGGGTATAAACAAGAATTGGTTAGAAACGCAGAGCCTTTAATTACCGAGGAGCCACTGAAGCCATGGATTACTTTGAAGAGGAACATAAAGAACATAAAGTACCTTCCATCAATGGTTGATATAAGCTTCAAGAATCGGTATGTTTATGTGGATGTTGGAGCTAGAAGTTATGGCTCTAGTATAGGAAGTTGGTTCAGGAAGCAGTATCCAAAACAGAACAAGACCTTTCATGTGTATGCAATTGAGGCTGATAAAACTTTTCATCAAGAGTATAGTTTGAAGAAGGGAATCACTTTGCTACCTTATGCTGCTTGGGTCAAGAATGAGACTTTAACCTTTGAAATTCATCGTGACCCGGGTGAGCATGTTGAAGTTAAAGGTAGAGGCATGGGTAGGATTCAGCCATTGCAGTCATCATCATCATCTGATGGTTTTGATGGTGAGGTTGAGAAAATCCAAGGGTTTGACTTTGCAAACTGGTTGAAGAACAGTGTCTCAAAGAATGATTTTGTTGTGATGAAGATGGACGTGGAAGGTACTGAATTTGATTTGATTCCAAGATTGTTCGAAACCGGAGCTATCTGTCTGGTGGATGAGATTTTTCTTGAATGCCACTATAATAGGTGGCAACGATGCTGCCCTGGGCAAAGGAGTTCAAAGTATGAGAAAACTTATGATCAATGCTTGGAGCTCTTCACTTCTCTTAGGCAAAGAGGAGTTCTTGTTCATCAATGGTGGTGA 1548 0.449 METATGKPGYLRNVLIRLLLFGVFIIIVRFAYVVTIAGESCNVGDFCFFSFPETLNFVIAGAGSGALAVASNDAVSIGSTARPEVYASKDWFEAVHFYTSVFQDLISDGYLSPQSKSLCVETPTGRDVLALKEIGVSDSIGISKKASKPLVKAGQAHRIPFRDNTFDFIFSGEGGLEKSARPSDFASEIARTLKPEGFVVFHIKAKDTYSFNSFLDLFNNFKVVKSHDIDGFDSSMPHIREIVLRKEYDGIVHEFEQFDDDSNGKCSSHGYKQELVRNAEPLITEEPLKPWITLKRNIKNIKYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYSLKKGITLLPYAAWVKNETLTFEIHRDPGEHVEVKGRGMGRIQPLQSSSSSDGFDGEVEKIQGFDFANWLKNSVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLELFTSLRQRGVLVHQWW 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0107 515 Gene3D Vaccinia Virus protein VP39 139 276 IPR029063 -
Dere12g0107 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 232 IPR029063 -
Dere12g0107 515 Gene3D Vaccinia Virus protein VP39 301 480 IPR029063 -
Dere12g0107 515 Pfam Methyltransferase domain 151 201 IPR013216 GO:0008168
Dere12g0107 515 Pfam Methyltransferase FkbM domain 320 495 IPR006342 -
Dere12g0107 515 PANTHER METHYLTRANSFERASE 1 515 - -
Dere12g0107 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 302 458 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0107 Dere-ChrDere12 1380879 1382426 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0107 12 1380879 1382426 Dere11g0095 11 1553710 1555266 CCT
Dere12g0107 12 1380879 1382426 Dere12g0107 12 1380879 1382426 ECH