Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0029 ATGGGTCTTTGCCTGTCTAAGTCTCGAACTACGAAGGATGATGATTCTGATCATCATGTGGAGTTAGCTTCCGGGAATGTACAGCTTATTACCAGCAAAGAAATATGGGAACAAAAGATGGCAGAAGCAACAAGGGATGGCAGGATTGTGATTGCAAATTTCAGTGCATCGTGGTGTGGTCCTTGTAAGACGATTGCACCATATTACAGCGAGTTATCTGAGAAACACCCATCTTTGATGTTCCTATTAATTGATGTCGATGAACTAACTGACTTTAGCACTTCCTGGGACATCAAAGCCACTCCAACTTTCTTCTTTCTGAAAAATGGACAACAGATTGACAAACTTGTTGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATTAGTGGCATTGCTGAATCAATTTCCAAGCCCCAAAATCAATACTGA 429 0.4196 MGLCLSKSRTTKDDDSDHHVELASGNVQLITSKEIWEQKMAEATRDGRIVIANFSASWCGPCKTIAPYYSELSEKHPSLMFLLIDVDELTDFSTSWDIKATPTFFFLKNGQQIDKLVGANKPELQKKISGIAESISKPQNQY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0029 142 Gene3D Glutaredoxin 1 139 - -
Dere12g0029 142 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
Dere12g0029 142 PANTHER THIOREDOXIN 27 128 - -
Dere12g0029 142 CDD TRX_family 42 128 - -
Dere12g0029 142 Pfam Thioredoxin 31 128 IPR013766 -
Dere12g0029 142 SUPERFAMILY Thioredoxin-like 21 131 IPR036249 -
Dere12g0029 142 PRINTS Thioredoxin family signature 97 108 - -
Dere12g0029 142 PRINTS Thioredoxin family signature 58 67 - -
Dere12g0029 142 PRINTS Thioredoxin family signature 50 58 - -
Dere12g0029 142 ProSiteProfiles Thioredoxin domain profile. 9 133 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0029 Dere-ChrDere12 292739 295314 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0029 12 292739 295314 Dere11g0047 11 613773 617281 CCT
Dere12g0029 12 292739 295314 Dere12g0029 12 292739 295314 ECH