Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1942 ATGGCGGCAACCCAACCACAGGGTCCGGATCGTACGACCGAAGAGGTAGCAGCTGAACCAGACAAAATGAAGGATATGCTTCATTCATCAATACCAGATAGGTCAATTACTTCTAATTCCTCTCAGGATATTGCAACCATGGGCCATTCAAGGGAAACAGCAAGTCAATCAGGGTCATTTATTTCAGGTGGAGGTTGTCCTCTCTATCCTCCTAATGTCTATGCACCACAGGCCCAGGCTTTCTTCTACCAAGGTTTTGAAAATGCCAATGGAGAATGGGATGATTATCCTTCGTATATCAATTCTGAAGGATTGGAAATTGGATCTCCTGGTCTCTACAGTGATAATCCATCTGTTCTTTTCCATTCTGGATATGCCTTCAACCCACAAATGCCTTACGGACCATATTCCCCTGTTACAACACCTTTGCCTTCTGTAGGTGGAGATGCACAATTATACTCCCCCCAGCAATTTCCATACACTGGCCCACCTTATTACCATCAGCTAGTTCCTCCTAGCTTACCATATCTTACTTCACCAGTTCCAGCTTCATCACCAGAGCTCACCAACTTGGTTGGCCTTGATCGACAAGGTGATAGCATAGTTTTGGGACCAAGACCTGGCTATCCTTCAATGGGATCCTTTGGTAGAGGCAGTTTTCCGGGAACACCTGGTTCTTTTGGCTTTCATGATTCCCAACAAGGGTTTGATGGATCAAGATCCAGTGCAAATGGAATCTGGTCAGACAGCTCGAAACCCTCTGAAAGGCAGATGTCCTTGATGCCCCTATCACCAGCAGTATCTCCACAGCCAATTGGGTCACTTGGGCCATTTGGGCAGAGTGTGGGAATGGCTTCTCTTCAACAACAACCATTGTATGGGTTTGGATCTGGTTTAAACTCCTATGGTAGAGACTACCTGCCTAACCAGGGTTCTAGATTTAGTGGCCCTGCCATGTATGGTCTTGGTGCTAATGATAGGAACTGGCTTTCTTTTGAAAATAGCAGACGGCGTGACAGGGGAGCGTCTTCTTGTTGTAGTTGTGATGGTACTCCTGATATACTTAGCGAGCAGAATCGCGGTCCTAGGGCCTCAAAACTTAAGAATCACATATCAGCCGAAATTATGTCTGTTGATAATAGTAAAAATAGTACTTCTACTCGCAAATTCAACAGTGAATCATTTAACCGGCCAGAGTTTATGACAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGTATCAAATATGGTGTCTGGGCCAGTACACCAAATGGAAATAGAAAGTTAGATGCTGCATATCGCCAAGCAACAGAGAAGCAAGATGCCTGCCCTATATTTCTCTTCTTTTCGGTAAATGCTAGTGCTCAGTTTTGTGGGGTGGCTGAAATGGTTGGGCCTGTTGACTTTGACAAGAGTGTGGACTACTGGCAGCAGGATAAGTGGAGTGGACAATTTCCTGTCAAGTGGCACATAATTAAAGATGTCCCTAACAGTCAGTTTCGACACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACCAACAGTCGAGATACTCAAGAGGTGAAGCTGCAACAGGGAATTGAAATTTTGACCATTTTTAAGAATTATGAAACTGAAATGTCCATCCTAGATGATTTTGATTTCTATGAAGACCGGCAAAAGGCTATGCAAGAACGGAAGGCAAGGCACCAAGCCAGCCTGATGGCTATAGCAGTTGGAGAAAGTGAACGTAGGAGTTCTGCCAGCACAAATGGTGATTTCATGAAGCAGATGTCGAAGAGCTTTGCACAAGTTGTCCGCATAGAAGAGGGTAACAATGAAGTGACCGTTACTGATAGGGGTAGTTTAACCACTGATGGCTCTAGTGGTCCTGTAGTCAAGCCGGATGATGGTATTCTTGTGGCTGCCTCTTCAGTCCAAACCATTTAG 1962 0.4429 MAATQPQGPDRTTEEVAAEPDKMKDMLHSSIPDRSITSNSSQDIATMGHSRETASQSGSFISGGGCPLYPPNVYAPQAQAFFYQGFENANGEWDDYPSYINSEGLEIGSPGLYSDNPSVLFHSGYAFNPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPYTGPPYYHQLVPPSLPYLTSPVPASSPELTNLVGLDRQGDSIVLGPRPGYPSMGSFGRGSFPGTPGSFGFHDSQQGFDGSRSSANGIWSDSSKPSERQMSLMPLSPAVSPQPIGSLGPFGQSVGMASLQQQPLYGFGSGLNSYGRDYLPNQGSRFSGPAMYGLGANDRNWLSFENSRRRDRGASSCCSCDGTPDILSEQNRGPRASKLKNHISAEIMSVDNSKNSTSTRKFNSESFNRPEFMTDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQATEKQDACPIFLFFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEILTIFKNYETEMSILDDFDFYEDRQKAMQERKARHQASLMAIAVGESERRSSASTNGDFMKQMSKSFAQVVRIEEGNNEVTVTDRGSLTTDGSSGPVVKPDDGILVAASSVQTI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1942 653 MobiDBLite consensus disorder prediction 31 46 - -
Dere11g1942 653 MobiDBLite consensus disorder prediction 238 257 - -
Dere11g1942 653 FunFam YTH domain family 1, isoform CRA_a 386 559 - -
Dere11g1942 653 Gene3D ph1033 like domains 382 559 - -
Dere11g1942 653 ProSiteProfiles YTH domain profile. 407 544 IPR007275 GO:0003723
Dere11g1942 653 CDD YTH 408 544 IPR007275 GO:0003723
Dere11g1942 653 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 92 615 IPR045168 -
Dere11g1942 653 MobiDBLite consensus disorder prediction 1 46 - -
Dere11g1942 653 MobiDBLite consensus disorder prediction 14 29 - -
Dere11g1942 653 Pfam YT521-B-like domain 407 545 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1942 Dere-ChrDere11 33262325 33270517 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1942 11 33262325 33270517 Dere11g1942 11 33262325 33270517 ECH