Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1932 ATGGATTCAAAGAAGTCTAACAAGATCAGAGAGATCGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAGGTTGCAAATGCTTCCAAAAGCTCGTCTGCCTCTGCTTCCTCTTCAGCCATTAGCAGCAACAGTAATAGCGGAAGTAAAGGCATCAAGTTCCTGAGGAGAACTCTGTCATTCACGGATGTTTCGTCCTGTGACAACGTCGTCCCGAAAGGGTTTCTTGCAGTTTGCGTTGGGAAAGAGCTCAAGAGATTCATCATCCCCACGGAGTACTTGAGACACCAAGCATTTGAGGTCTTGCTGCGAGAAGCCGAAGAGGAATTCGGTTTCCATCAAGAGGGAGTCCTCAAAATTCCGTGCCATGTTTCCTTGTTCGAGAAGATATTAAAGGTGGTGCAAGACAAAAAGCAAGTCTTTTTCAGTGCAGACAAGGACCCTGTTAGTTGTTACGCATCAGATTGTGAGGTTACCCCCACTCATCATGCTCAAACGTGTAGATGA 507 0.4576 MDSKKSNKIREIVRLQQILKKWKKVANASKSSSASASSSAISSNSNSGSKGIKFLRRTLSFTDVSSCDNVVPKGFLAVCVGKELKRFIIPTEYLRHQAFEVLLREAEEEFGFHQEGVLKIPCHVSLFEKILKVVQDKKQVFFSADKDPVSCYASDCEVTPTHHAQTCR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1932 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 130 IPR003676 GO:0009733
Dere11g1932 168 Pfam Auxin responsive protein 20 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1932 Dere-ChrDere11 33131025 33131531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1932 1 168 Calmodulin-binding Proteins AT2G24400 54.595 1.72e-60 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1932 11 33131025 33131531 Dere11g1932 11 33131025 33131531 ECH