Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1834 ATGCTGTGCAGTAAGGGTGCCCGGAAAGGCGGATCGGGATCGGTGCCGGTTTACCTCAATGTGTACGATCTGACTCCGATTAACGGCTACGCTTACTGGTTCGGCCTCGGCGTCTTCCATTCCGGCGTTCAAGTTCATGGAGTGGAGTACGCATTCGGAGCTCACGAGTACTCGTCGACGGGGATATTCGAAGGAGAACCGAAACGCTGTGAGGGTTTCGTGTTTCGGAAGACGATACTGATCGGGAAGACGGAGATGGGAGAGGAAGAGGTGAGGGGCGTGATGGATGAGCTTGCAGGAGAGTACAGAGGGAATGCCTACAACCTCATCACCAAGAATTGCAACCATTTCTGCAACGATGCTTGCATTAGACTCACTGGAAATCCTATTCCCAGTTGGGTCAATCGTCTTGCTAGAATCGGGTTCTTGTGCAATTGTGTTCTTCCAGTGACTCTAAACTCAACCAAAGTTACGCATCACAGAATTGAAGACAAGCAATGTGAAGGAGAGAAACAAGCATCAACAAGCGAGCCAAATAACAAGGTTGCACGTTCAAATTCATCATCTTCTTCCTCATCATCCCCTGCTTCTACCTTCAATGGAACACGCAGAGGAAGGAATAGAAGCAGAGGTGCCCTGCCTCCATCTTCTCCTTTGGTTACTGAGTCTTCTTCTTCTTCATCATCTTCATGTCCAAAATCTGAACATTAA 711 0.4852 MLCSKGARKGGSGSVPVYLNVYDLTPINGYAYWFGLGVFHSGVQVHGVEYAFGAHEYSSTGIFEGEPKRCEGFVFRKTILIGKTEMGEEEVRGVMDELAGEYRGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVTHHRIEDKQCEGEKQASTSEPNNKVARSNSSSSSSSSPASTFNGTRRGRNRSRGALPPSSPLVTESSSSSSSSCPKSEH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1834 236 PANTHER DESUMOYLATING ISOPEPTIDASE 14 200 IPR008580 GO:0008233
Dere11g1834 236 Gene3D PPPDE domains 12 171 IPR042266 -
Dere11g1834 236 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Dere11g1834 236 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
Dere11g1834 236 MobiDBLite consensus disorder prediction 163 236 - -
Dere11g1834 236 MobiDBLite consensus disorder prediction 172 205 - -
Dere11g1834 236 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
Dere11g1834 236 MobiDBLite consensus disorder prediction 214 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1834 Dere-ChrDere11 32261115 32263369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1834 11 32261115 32263369 Dere11g1834 11 32261115 32263369 ECH