Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1798 ATGTTATACCTTTCCCGACTTCTTTGTCAAGATGATCTCAACAAGGAGGAGGAGGAGGAGAAGAAGAAGAAAGTGAGAAAAATGTCGAAAGAAGAAGTGTTCATTGGGTCAATCGACCAAGGAACCACCAGCACCAGATTCATAATCTACGATCGGTCAGCTCGCGCAATCGCATCTCACCAGGTCGAGTTCACTCAGTACTACCCAGAAGCAGGATGGGTGGAGCATGATCCCATGGAGATCCTGGAGAGCGTCAGGGTGTGTTTCGCTAAGGCTCTCGAGGGGTTGAACGTCGACAAGAAATTGAAGGCAATTGGTGTGACCAACCAGAGAGAGACGACTCTACTTTGGAGCAAATCCACTGGAATTCCCCTCCACAACGCCATCGTTTGGATGGATGCTCGTACCAGTTCTGTGTGCAGGAAGTTGGAAAAGGAGTTACCAGGCGGGAGAACCCATTTTGTGGAAACTTGTGGTTTGCCCATAAGCACTTACTTTAGTGCCACTAAACTGCTTTGGTTGATGGAAAATGTGGATGCAGTCAAGGATGCTATAAAGAAAGGAGATGCTCTATTTGGAACTATAGATACTTGGTTAATATGGAATTTAACTGGCGGGTTGAAGGGGGGATTGCATGTCACTGATGTTTCAAATGCTTCACGGACAATGCTGATGAATCTTAAAACCCTTGACTGGGATGCATCCATCTTAAAATCCCTCGGAATTCCTGCTGAAATTCTGCCTAAAATTATTAGTAATTCTGAAATCATTGGAAATATTACTTCGGGATGGCCAATCACTGATGTCCCAATTGCTGGGTGTCTAGGGGATCAACATGCTGCAATGCTAGGACAAGCATGCCGAAAAGGTGAGGCTAAAAGCACTTATGGCACTGGTGCTTTCATACTCCTAAATACTGGTGAAGATATAATTCAGTCAAAGCATGGTCTCCTAACCACTCTAGCCTTCAAGCTTGGTCCACAAGCTCCAACAAATTATGCACTGGAAGGATCCATTGCAATTGCTGGAGCTGCTGTGCAGTGGCTAAGAGATAGTCTTGGTGTCATTAGTAGTGCTAAGGAGATAGAGGATCTTGCATTACAGGTTGAGTCCACAGGTGGAGTTTATTTTGTTCCTGCATTTAATGGATTGTTTGCCCCATGGTGGCGGGATGATGCTCGTGGGGTTTGTATAGGAATAACAAGGTTTACAGGCAAGGCTCACATTGCTAGAGCTGTGCTTGAGAGCATGTGCTTTCAAGTGAAAGATGTCTTGGATTCAATGCACAAAGATTCTGAGGAAAATGGGGAAGATAAGACAGAAAAGAAGGAATTTTTGCTGAGAGTAGATGGCGGGGCAACTGTCAACAATCTTTTGATGCAGATTCAGGCGGACTTGTTGGGAAGGCCGGTGATTAGACCAGCTGACATAGAGACAACAGCGCTTGGTGCTGCCTATGCTGCTGGGTTAGCGGTTGGGGTTTGGAAAGAAGATGAGATCTTTGCTTCTGGTGAGAAGGTAAAGACTTCGACTGTTTTTCGTCCAGTATTAGATGAGCAACTGAGGAAGAAGAAAGTGGAATCTTGGTGCAAAGCTGTTACCAGAACTTTTGACTTGGCTGATCTTTCCCTTTGA 1635 0.452 MLYLSRLLCQDDLNKEEEEEKKKKVRKMSKEEVFIGSIDQGTTSTRFIIYDRSARAIASHQVEFTQYYPEAGWVEHDPMEILESVRVCFAKALEGLNVDKKLKAIGVTNQRETTLLWSKSTGIPLHNAIVWMDARTSSVCRKLEKELPGGRTHFVETCGLPISTYFSATKLLWLMENVDAVKDAIKKGDALFGTIDTWLIWNLTGGLKGGLHVTDVSNASRTMLMNLKTLDWDASILKSLGIPAEILPKIISNSEIIGNITSGWPITDVPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEDIIQSKHGLLTTLAFKLGPQAPTNYALEGSIAIAGAAVQWLRDSLGVISSAKEIEDLALQVESTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTGKAHIARAVLESMCFQVKDVLDSMHKDSEENGEDKTEKKEFLLRVDGGATVNNLLMQIQADLLGRPVIRPADIETTALGAAYAAGLAVGVWKEDEIFASGEKVKTSTVFRPVLDEQLRKKKVESWCKAVTRTFDLADLSL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1798 544 NCBIfam glycerol kinase GlpK 34 537 IPR005999 GO:0004370|GO:0006072
Dere11g1798 544 SUPERFAMILY Actin-like ATPase domain 35 287 IPR043129 -
Dere11g1798 544 Pfam FGGY family of carbohydrate kinases, N-terminal domain 35 284 IPR018484 GO:0005975|GO:0016301
Dere11g1798 544 Gene3D - 30 285 - -
Dere11g1798 544 SUPERFAMILY Actin-like ATPase domain 287 537 IPR043129 -
Dere11g1798 544 PANTHER SUGAR KINASE 34 538 - -
Dere11g1798 544 FunFam Glycerol kinase 286 539 - -
Dere11g1798 544 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 165 177 IPR018483 GO:0005975|GO:0016773
Dere11g1798 544 FunFam Glycerol kinase 32 285 - -
Dere11g1798 544 Gene3D - 286 539 - -
Dere11g1798 544 PIRSF GlpK 32 543 IPR000577 GO:0005975|GO:0016301
Dere11g1798 544 Pfam FGGY family of carbohydrate kinases, C-terminal domain 292 491 IPR018485 GO:0005975|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1798 Dere-ChrDere11 31870004 31873173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1798 11 31870004 31873173 Dere11g1798 11 31870004 31873173 ECH