Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1794 ATGGCCCCCAGGTCAGGGAGAGGGAAATCGAATAAGGCTAAGGCGGAGAAGAAGAAAAAGGAAGAGAAAGCATCAGTGCCGTCTCTTGTAGACATAAATGTGGTCACTCCCTATGATTCTCAAGTTGTCCTCAAGGGTATCTCTACTGATAAGATACTTGATGTAAGACGGCTATTGGCTGCGAATGTAGAGACCTGCCATTTTACAAATTATTCTTTATCTCACGAGGTTAAAGGGCATAGACTGAATGACAGAGTGGAAGTTGTTACTCTAAAGCCATGTATTCTAAGAATGGTTGAAGAGGATTACACAGAGGAAGCTCAAGCTGTTGCACACGTGCGGCGACTCTTGGACATTGTGGCCTGCACAACCAGGTTTTCGAAGCCCAGACGGACCTTGACAAGCCCAGATTCCAAAGCTAAGAAAAACAGTAAGGCCCAACATCACAATAAACGTAGTTCGAGCCCACCAACGACACCCAATGGGGAAATCCAGATCGGGTCGCGGACGTCGGAGCAGCCTGTCTCACCGATCTCGGATAGTGTAGGCATGGTGGCCATTCATCCGACGCCGAAGCTTTCAGATTTCTACGAGTTCTTCTCTTTCTCTCACCTCTCTCCTCCGATTTTACATTTGAAGAGATGTGAACTGAAGAATGGAGATGATAGGCGCAAAGAAGATTACTTTCAGCTTCAGATCAAAATATGCAACGGGAAGCTGATAGAAGTGGTAGCATCAGAAAAAGGGTTTTATATTATGGGAAAGCAGTCACTTAAGAGCCATTCTTTAGTTGATCTTCTGAAACAACTTAGCCGAGGCTTTGCTAATGCATATGGATCGTTGATGAAAGCATTCGTGGAACACAATAAGTTTGGTAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTTGCCGAGTGTCCTTCAAACTTTCCTGCCCTACCTTCTGAGGACGAAAACTGGGGTGGAAATGGTGGTGGCCAGGGAAGAAAGGGTGAATACAATCTTAGACCATGGGCTACAGATTTCGCAATATTGGCTTCTCTGCCTTGCAAAACTGAGGAGGAGAGGGCGGTCAGAGACAGAAAAGCTTTTCTACTTCACAGTCAATTTGTTGATACCTCAATATTTAAGGCTGTTGCAGCTATAAGGCGCGTCATAGACTCAAAGTCAAATGGAGATAACAAATTGAATTGTTCTCCGGGTTCAATCGTGCATGAAGATCGTGTGGGGGACTTATCCATTACAGTCAAACATGATATCAGGGATAGATACCAAAATTATGATATGAAAGTTGAGGATGCTCAGAAAAATTTACTCAAAGGATTGACTGCAGATGAAAGTGTTATTGTTCATGATACTTCTTCCTTGGCTGTCGTTGTCGTCCGCTACTGTGGATACACTGCAACAGTAAGGGTGGTGGGTAACATCAACACAAGGAAGCCTGAATGTCAAGATATCGAAATAGATGATCAGCCAGATGGAGGGGCAAATGCTCTCAACGTCAACAGTTTCAGGCTACTGCTTCACAAGTTTGGAGCTGAGCCATCAGAAGGGAGGTCATCACTATCAAATTTGAATGATTTAGACTCTTCTAGAAATCTTGTTCGGAAGGTGGTTAATGAAAGCTGGAAAAAGATAAATGAGGAGCCAGTTACTTCAGAAAGGTCTATTCGGTGGGAACTCGGTTCTTGTTGGGTTCAGCATCTTCAAAAACAAGAAACTTCAACAGATAAAAGTTTCCGGAAAAAGGAAGATGGCAACGAAGTTGAACAAGCTGTCAAAGGTCTCGGGAAGCAATTCAAATTTTTGAAGAGCAGGGAAAAGAAACCAACTAGTATAGATTGTACAGATTATAGAGAGCAAAATGAATCTAGACCTGGTAATGTGGAAACTGATAAAACTGAGACAAACAATGATGACTTAAGTAGCTCTGCTGAATTGGAGAAACTACTTTCAGAAGAAGCATTTTTGCGTCTGAAAGGATCTGGAACTGGTCTTCATCAAAAGACAGTTGATGACCTTATCAACATGGCACACAAGTACTATGATGAAATTGCGTTGCCAAAGCTGGTTACAGACTTTGGATCTCTTGAACTTTCACCAGTTGATGGCCGAACGCTAACTGACTTCATGCATTTAAGAGGATTAAAGATGCACTCCCTGGGTGAAGTGGTTAAACTTGCACAAAATCTTCCACATATACAATCCCTTTGTATTCATGAGATGTTTACCCGAGCTTTCAAGCATTTACTTAAAGCAGTTATTGCGTCTGTTGACAATATAGCAGACCTTTCTCCTGCTATTGCATCAACGCTGAATTTCTTACTTGGAAGCTGTCGATTGGAAAATACTGACCAAACTTTGACTGAGGACAATCATCTCAGATTGCAGTGGTTACGGGTTTATTTAAGGAAAAAATTTGAATGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTATCGATACTTAGAGGGCTTTGTCATAAGGTTGGATTGGAACTGTTCCCAAGAGATTATGACATGGAGACTCCCAAACCCTTTGGGAAATATGATATTATCAGCCTGGTTCCTGTTTGCAAGCACGTAGGATGCTCCTCAGCAGATGGACGCAATTTATTGGAATCATCCAAAATGGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTTTGGAACAAAGGCATTGGCAAAGATGATGGCTGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTATAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAATCAAGCAACCATATATCAGCAAAAGGCCCTGGACATAAATGAGAGAGAGCTTGGGCTTGACCATCCAGACACAATGAAAAGTTACGGAGATCTTTCTGTCTTTTATTATCGTCTGCAACACATGGAGCTGGCTCTGAAGTATGTCAATCGTGCTCTCTTCCTTCTTCACTTTACATGTGGACTGTCTCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCATGTGGCGCTTAGATACTTACATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGAAGATCATATACAGACTGCTGCAAGCTTCCATGCCATTGCCATAGCTCTTTCATTGATGGAAGCCTATTCCTTGAGTGTACAACATGAGCAAACTACCCTTAAGATACTTCAAGAAAAGCTTGGATCTGAAGATCTGCGTACACAGGATGCCGCTGCATGGCTTGACTATTTTGAATCAAAAGCAATAGAGCAGCAAGAGGCAGCTAAAAATGGGACTCGAAAGCCAGATGCCTCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTCATAAGCCCTGAACAAGAGCCAAAAGAAAATGATGCTCAGCGGAAACATCGGCGTGCAAAGATACACCCAGTAAGTGATAAAAACCATGAAGAACACGATGATTCAATAGCTGATGAGGACATTCCCTTTGATGGCTCAAAGGATGGTAGAAGTATGGAAGAAGGCAACACAGAAGAAAGAAATGTCACGCTTCATTCTGAAGAACTGAAAGAAAATAGTGAGTTTACTAGGCGTGTTCCAATGACAAGTGAAGTTGTTGAGGAAACATCGTCTGATGAAGGGTGGCAAGAAGCCAATTCTAAAGGGCGGTCAGTAAACACAGCTAACGGCAAGACTGGCCGGAGGAAACCTCTTGTTGCTAAGCTGAGGATTAATAGTTCTGAGAATTACATTGTCAGAGGGAGCAGTCACAGGAATGACATTACTTCACCACCACAACAAGGAACTCCAAAAACCACCTCAACCATGTCATCTCCCCCTAGACAATCACGAGTTAGAAACATCCCTTTAAAAGACGAACCCGTTAATCATCCAACAAAAACTTCAGTGTCCAAAATTTCGTCTGCTCCAGCAGCTCTTAGTCCTTTGGCTTCAAAGTCTATAACCTACAAAGAAGTAGCTCTGGCACCCCCAGGTACGGTTTTAAAGCCCTTGTTGGAGAAAGTTGAAGTGGACAACGTAAAGGCTGAAAATGAGAAGTGCAATAGAGTTGGAGAAAGCTGCCAGAGCTCCGTAGTTGAAGCAGTTTCTGAGCATGATAAAAAAGAGGGAACTTGTGATAGCGATAATCAACAAGAAGATTCTGCATCAGAACCTGAGGAGGGGTCCCTCTCTTCTGATCAGGCAAAACTAACAGAAACCAATGGTAGTAAGCTTTCAGCGGCAGCCAAACCATTCAACCCAGGAATGTTGTTCATGCCTCACCATTTAAATTCGATTGCCGTCACAAGCATTTATGATACAAATGCTAGTCAAGGCATGGCTGTGGAGCCAGTGCTTCCTCCTGTTGCTGCTAGGGTCCCCTGTGGGCCTAGATCCCCTCTATATTATAGAACCAACTATACCTTTCGCATGAAACATGGTTATACAAAAAATCACACCCCCATCAGGGAAAGAAGTGGATTTGGAGCTCCGAGAATCATGAATCCACATGCACCTGAGTTTGTTCCTAGAAGACCTTTGCAAATGGAAACCAATGATGCCAATTCAACAGTTTCCAGCGGGTTTAACTCTTCAATTGAAACAAGTTTGGCTGAAAACAACAATCTAGGTGAAAAATTCATCAAAGATTTCAAGGATGGTTCTCCTTCTCAGAAGTCAGAGCTAGGAAGGCAGATATTGTTTAGTTTGCTTATGAAATCAGCTCAGCAAAGTATTGATTCTGCGGATGAATCCAAAGTTAGTGAAGAAAAGCGCAAGAATTTGGAAAATTCTTCTGATGCAATTGCCAAAGACAGTGCTATTTTAAAAGTCCTACATAGTGATGAAGAAAAGAATAAGAATATGGTTCCTCAATCCAATGCTAGTGAAGAGCAAGAAAAAGTAGATCTAACCAAGAAAAGTAACGGAGATGGTGAAGGATTTATAGTTGTCACAAAAAGGAGAAGGAGTAAGCAGAAGTTTACAAATGGAGTAACAGATTTGTGCAACCAGCAGTCTATCTGTGCCTCAGTCCGTTGA 5073 0.4224 MAPRSGRGKSNKAKAEKKKKEEKASVPSLVDINVVTPYDSQVVLKGISTDKILDVRRLLAANVETCHFTNYSLSHEVKGHRLNDRVEVVTLKPCILRMVEEDYTEEAQAVAHVRRLLDIVACTTRFSKPRRTLTSPDSKAKKNSKAQHHNKRSSSPPTTPNGEIQIGSRTSEQPVSPISDSVGMVAIHPTPKLSDFYEFFSFSHLSPPILHLKRCELKNGDDRRKEDYFQLQIKICNGKLIEVVASEKGFYIMGKQSLKSHSLVDLLKQLSRGFANAYGSLMKAFVEHNKFGNLPYGFRANTWLVPPSVAECPSNFPALPSEDENWGGNGGGQGRKGEYNLRPWATDFAILASLPCKTEEERAVRDRKAFLLHSQFVDTSIFKAVAAIRRVIDSKSNGDNKLNCSPGSIVHEDRVGDLSITVKHDIRDRYQNYDMKVEDAQKNLLKGLTADESVIVHDTSSLAVVVVRYCGYTATVRVVGNINTRKPECQDIEIDDQPDGGANALNVNSFRLLLHKFGAEPSEGRSSLSNLNDLDSSRNLVRKVVNESWKKINEEPVTSERSIRWELGSCWVQHLQKQETSTDKSFRKKEDGNEVEQAVKGLGKQFKFLKSREKKPTSIDCTDYREQNESRPGNVETDKTETNNDDLSSSAELEKLLSEEAFLRLKGSGTGLHQKTVDDLINMAHKYYDEIALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMHSLGEVVKLAQNLPHIQSLCIHEMFTRAFKHLLKAVIASVDNIADLSPAIASTLNFLLGSCRLENTDQTLTEDNHLRLQWLRVYLRKKFEWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMETPKPFGKYDIISLVPVCKHVGCSSADGRNLLESSKMALDKGKLEDAVNFGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHMELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQEKLGSEDLRTQDAAAWLDYFESKAIEQQEAAKNGTRKPDASIASKGHLSVSDLLDFISPEQEPKENDAQRKHRRAKIHPVSDKNHEEHDDSIADEDIPFDGSKDGRSMEEGNTEERNVTLHSEELKENSEFTRRVPMTSEVVEETSSDEGWQEANSKGRSVNTANGKTGRRKPLVAKLRINSSENYIVRGSSHRNDITSPPQQGTPKTTSTMSSPPRQSRVRNIPLKDEPVNHPTKTSVSKISSAPAALSPLASKSITYKEVALAPPGTVLKPLLEKVEVDNVKAENEKCNRVGESCQSSVVEAVSEHDKKEGTCDSDNQQEDSASEPEEGSLSSDQAKLTETNGSKLSAAAKPFNPGMLFMPHHLNSIAVTSIYDTNASQGMAVEPVLPPVAARVPCGPRSPLYYRTNYTFRMKHGYTKNHTPIRERSGFGAPRIMNPHAPEFVPRRPLQMETNDANSTVSSGFNSSIETSLAENNNLGEKFIKDFKDGSPSQKSELGRQILFSLLMKSAQQSIDSADESKVSEEKRKNLENSSDAIAKDSAILKVLHSDEEKNKNMVPQSNASEEQEKVDLTKKSNGDGEGFIVVTKRRRSKQKFTNGVTDLCNQQSICASVR 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1264 1295 - -
Dere11g1794 1690 Coils Coil 423 443 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1594 1610 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 624 648 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1626 1653 - -
Dere11g1794 1690 SUPERFAMILY TPR-like 955 1074 IPR011990 GO:0005515
Dere11g1794 1690 ProSiteProfiles TPR repeat profile. 918 951 IPR019734 GO:0005515
Dere11g1794 1690 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1537 IPR027523 GO:0006996
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1154 1208 - -
Dere11g1794 1690 SUPERFAMILY TPR-like 884 987 IPR011990 GO:0005515
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1136 1247 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1365 1413 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1 23 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 129 176 - -
Dere11g1794 1690 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 873 1123 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 624 645 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 150 176 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1264 1317 - -
Dere11g1794 1690 SMART tpr_5 960 993 IPR019734 GO:0005515
Dere11g1794 1690 SMART tpr_5 918 951 IPR019734 GO:0005515
Dere11g1794 1690 SMART tpr_5 1002 1035 IPR019734 GO:0005515
Dere11g1794 1690 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1379 1393 - -
Dere11g1794 1690 Pfam Translation initiation factor eIF3 subunit 135 705 847 IPR033646 -
Dere11g1794 1690 ProSiteProfiles Clueless (Clu) domain profile. 322 586 IPR025697 -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1591 1610 - -
Dere11g1794 1690 Gene3D Tetratricopeptide repeat domain 876 1124 IPR011990 GO:0005515
Dere11g1794 1690 CDD CLU-central 707 848 IPR033646 -
Dere11g1794 1690 Pfam Tetratricopeptide repeat 1001 1075 - -
Dere11g1794 1690 Pfam Tetratricopeptide repeat 917 987 - -
Dere11g1794 1690 MobiDBLite consensus disorder prediction 1209 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1794 Dere-ChrDere11 31839522 31850352 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1794 11 31839522 31850352 Dere11g1794 11 31839522 31850352 ECH