Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1776 ATGAGCGTAGGGGAGGATCGAGCCATGGATTGGGTTAAAGAAAACGTACAGCCATTTCTCCCCGGAACTAAAATCCGCGGAATTGCAGTGGGAAACGAGATCCTTGGAGCGACGGACATGGATCTCTGGGAAGCCCTTCTCCCTGCAGCGAAGAATGTCTATAATGCCCTTTCTGTGCTTGGTTTGAATACCACCATTCAACTCTCGAGCCCCCACTCAGAGGCTGTTTTCGCCAATTCATTCCCTCCTTCCTCGTGCACTTTCAGACCAGATGTTGATCCGTTCATGAGGCCTCTGCTACAATTCTTCTCACAAACTGGGTCTCCATTTTTCATAAACGCGTACCCTTTTCTTGCGTACAAGAACGACCCACAACATATTGATCTTAACTACGCTCTTTTTCAGAAAAGTCCTGGGATTTACGATGCGAAGACGAAGCTGCATTATGATAACATGTTTGAGGCTCAGATTGATGCGGCTTATGCAGCTTTGGACAAAGCTGGGTTTGAGAAGATGGAGGTTGTGGTGTCTGAAACAGGGTGGGCTTCGCGTGGGGATGACAATGAAGCTGGGGCTACAATGAAGAATGCGAGGGCTTACAATAAGAATCTGAGGAGGAGGTTGTTGAAGAAGAAGGGGACACCTTACAGGCCCAAGAATGTGATGAGGGCCTATGTGTTTGCTCTGTTCAATGAGAATTTGAAACCTGGTCCCACATCGGAGAGGAACTTCGGATTGTTCAAGGCCGATGGAAGCATTTCTTATGACATTGGATTCACTGGGCTTGTGCCTTCTTCAGCAATCCCATCTCTTCTTTCCTTCAAGAAATCTCAGAAGCATATCAGTTTGTGGAGTTCTGGAGATCTTCTCCTGCAGAATTAA 882 0.4705 MSVGEDRAMDWVKENVQPFLPGTKIRGIAVGNEILGATDMDLWEALLPAAKNVYNALSVLGLNTTIQLSSPHSEAVFANSFPPSSCTFRPDVDPFMRPLLQFFSQTGSPFFINAYPFLAYKNDPQHIDLNYALFQKSPGIYDAKTKLHYDNMFEAQIDAAYAALDKAGFEKMEVVVSETGWASRGDDNEAGATMKNARAYNKNLRRRLLKKKGTPYRPKNVMRAYVFALFNENLKPGPTSERNFGLFKADGSISYDIGFTGLVPSSAIPSLLSFKKSQKHISLWSSGDLLLQN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1776 293 Gene3D Glycosidases 1 262 - -
Dere11g1776 293 SUPERFAMILY (Trans)glycosidases 6 258 IPR017853 -
Dere11g1776 293 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 260 IPR044965 GO:0004553|GO:0005975
Dere11g1776 293 Pfam Glycosyl hydrolases family 17 7 259 IPR000490 GO:0004553|GO:0005975
Dere11g1776 293 FunFam Glucan endo-1,3-beta-glucosidase 14 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1776 Dere-ChrDere11 31614101 31616232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1776 1 267 Glycoside Hydrolase AT3G15800 73.881 6.02e-148 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1776 11 31614101 31616232 Dere11g1776 11 31614101 31616232 ECH