Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1744 ATGAGTAGGCCAGGAGACTGGAACTGCAGGTCATGCCAGCACCTAAACTTCCAGAGAAGAGAGTCGTGCCAGCGATGTGGGGAATCAAAATACGGAGATAGACTTGATTTCGGTGGGTTTGGATCAGGAAGAGTCGGATCCTCTTTCGGGTTTAGTGGCGGGTCAGATGTTCGACCCGGTGACTGGTACTGTGGTGCTGGTAACTGTGGAGCACACAACTTCGCCAGTCGCTCCAGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACCTAGCTGGTGGCTTCAACACTGACATCTCTTGCTCAAGAGCTTTTGGGGGCGGTGGTGTCAGACCCGGCTGGAAATCTGGTGACTGGATATGCAACAGGTCAGGGTGCAACGAGCACAACTTTGCTAGCAGAATGGAATGCTTTAAATGCAGTGCCCCAAGGGACACATACTAG 441 0.5238 MSRPGDWNCRSCQHLNFQRRESCQRCGESKYGDRLDFGGFGSGRVGSSFGFSGGSDVRPGDWYCGAGNCGAHNFASRSSCFKCGAFKDDLAGGFNTDISCSRAFGGGGVRPGWKSGDWICNRSGCNEHNFASRMECFKCSAPRDTY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1744 146 FunFam Ran-binding zinc finger protein 52 89 - -
Dere11g1744 146 ProSiteProfiles Zinc finger RanBP2 type profile. 58 89 IPR001876 -
Dere11g1744 146 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Dere11g1744 146 PANTHER ZINC FINGER PROTEIN 55 144 - -
Dere11g1744 146 ProSitePatterns Zinc finger RanBP2-type signature. 62 83 IPR001876 -
Dere11g1744 146 FunFam Ran-binding zinc finger protein 105 145 - -
Dere11g1744 146 ProSitePatterns Zinc finger RanBP2-type signature. 118 139 IPR001876 -
Dere11g1744 146 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Dere11g1744 146 Gene3D - 110 145 - -
Dere11g1744 146 Gene3D - 2 32 - -
Dere11g1744 146 Gene3D - 54 89 - -
Dere11g1744 146 ProSiteProfiles Zinc finger RanBP2 type profile. 114 145 IPR001876 -
Dere11g1744 146 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Dere11g1744 146 SUPERFAMILY Ran binding protein zinc finger-like 54 88 IPR036443 -
Dere11g1744 146 SMART zf_4 60 86 IPR001876 -
Dere11g1744 146 SMART zf_4 116 142 IPR001876 -
Dere11g1744 146 SMART zf_4 5 29 IPR001876 -
Dere11g1744 146 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Dere11g1744 146 Pfam Zn-finger in Ran binding protein and others 114 143 IPR001876 -
Dere11g1744 146 Pfam Zn-finger in Ran binding protein and others 58 85 IPR001876 -
Dere11g1744 146 SUPERFAMILY Ran binding protein zinc finger-like 108 144 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1744 Dere-ChrDere11 31247163 31248234 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1744 11 31247163 31248234 Dere11g1744 11 31247163 31248234 ECH