Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1735 ATGCTACGTGGCACCGTAAGCACCGGTACATTGCAACCAGTTCCTGCAGTTTCTATACTACGCCATGGGCGCAAATTACACCGTTGGTTCGAAATTTATGAGCCCTCCCCACCAGTTCATACTTCGTTGAACTCCCGGTGCACGTTAGAACTGACCTCCATATCTTTCTTTCTTTCTGTGCACTGTACCAACCCTTCAATGGCGTCCGGGTCAGCTTCTCTGATGTGGTTCCGAAAGGGTCTCAGGATCCATGACAACCCGGCTCTGGCTTTCGCATGCAAAGGGTCGGCTTGTCTTTACCCTGTCTTCGTTATCGACCCGCATTACATGGAGCCGGACCCGAGTGCATTTTCTCCCGGGTCTACGCGTGCCGGTCTCAACCGGATTAAGTTCCTGCTAGAAAGCCTTGAGGACCTTGATTTGAGCCTTAAGAAGCTCGGGTCGCGATTGCTGGTTCTTAAGGGTGAACCAGGCCAGGTTCTGATTCATTGCTTAAAGGAGTGGAACATCAGAAAGCTTTGCTTTGAGTATGACACTGAACCATACTATCAGGCTCTAGATACCAAAGTTAAGAACTATGCAGTTTCAGCTGGAGTTGAGGTTTTCTCTCCTGTAAGTCACACGCTCTTCAATCCTGCAGATATCATACAAAAGAATGGAGGGAAGCCGCCCCTTAGTTACCAATCATTTGTGAAGCTTGCTGGGCAACTGTCATCCCCTCTCTTGACTACGGTTTCTTCACTTCCACCTGTTGGCCATCTTGGAAGTTGTGAGATCTCTGAAATTCCAACAATTGAAGAGCTTGGATATGAAAATATTAAACAGGATGAATTTTCTCCTTTCAAAGGTGGTGAATCAGAAGCATTGAAGAGGCTGACAGAATGCATGAAAAAAAAGGAGTGGGTGGCCAACTTTGAGAAACCCAAGGGTGATCCATCTGCGTTTCTCAGACCGGAAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTTTATCTTCCAGATATTTCTACCGTCAGATTCAGGATGTTTATAAAACTATGCCAAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTTTTCTACACGGTGGCGTTTGGAACTCCAAATTTTGACACGATGAAAGGCAATAGAATATGCAAGCAGATACCTTGGAAGGATGATGACAAACTTCTGGAGGCTTGGAGAGAGGGCAGGACAGGATTTCCTTGGATTGATGCCATCATGGTTCAGCTACGCCAATGGGGTTGGATGCACCATCTGGCACGGCATTCTGTTGCATGTTTTCTTACTCGTGGTGACCTGTTTGTTCATTGGGAAAAAGGGCGTGATGTCTTTGAGAGGCTTCTTATTGATTCAGATTGGGCAATTAATAATGGGAACTGGCTTTGGCTCTCATGTTCCTCCTTCTTTTATCAGTATAATCGGATTTATTCCCCTATCTCATTTGGTAAGAAGTATGACCCTAAAGGAGACTACATCAGGCATTTTCTCCCTGTCTTAAAAGACATGCCCAAAGAGTACATTTATGAACCATGGACTGCTCCTCTAAGCGTTCAGACCAAAGCAAACTGCATTATAGGCAAAGACTACCCAATGCCAGTTGTTTCTCATGATTCTGCAAGCAAGGAGTGCCGAAGGACAATGGCTGAGGCATATGAGTTGAACAAGGAAATGAATGGTTTGATAAGCGAAGAAGATTTGAAAAACTTAAGGAGGAAATTAGATGAGGGTCAAGAAGAGCAAGGGGCTAAGCATAAAAGACGCAGACAGCTGCTAATTGGGTGA 1809 0.4511 MLRGTVSTGTLQPVPAVSILRHGRKLHRWFEIYEPSPPVHTSLNSRCTLELTSISFFLSVHCTNPSMASGSASLMWFRKGLRIHDNPALAFACKGSACLYPVFVIDPHYMEPDPSAFSPGSTRAGLNRIKFLLESLEDLDLSLKKLGSRLLVLKGEPGQVLIHCLKEWNIRKLCFEYDTEPYYQALDTKVKNYAVSAGVEVFSPVSHTLFNPADIIQKNGGKPPLSYQSFVKLAGQLSSPLLTTVSSLPPVGHLGSCEISEIPTIEELGYENIKQDEFSPFKGGESEALKRLTECMKKKEWVANFEKPKGDPSAFLRPETTVLSPYLKFGCLSSRYFYRQIQDVYKTMPKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDTMKGNRICKQIPWKDDDKLLEAWREGRTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPKGDYIRHFLPVLKDMPKEYIYEPWTAPLSVQTKANCIIGKDYPMPVVSHDSASKECRRTMAEAYELNKEMNGLISEEDLKNLRRKLDEGQEEQGAKHKRRRQLLIG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1735 602 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 71 209 IPR006050 -
Dere11g1735 602 Gene3D HUPs 67 206 IPR014729 -
Dere11g1735 602 PANTHER CRYPTOCHROME 72 564 IPR002081 -
Dere11g1735 602 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 376 600 - -
Dere11g1735 602 Pfam FAD binding domain of DNA photolyase 360 557 IPR005101 -
Dere11g1735 602 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 270 563 IPR036134 -
Dere11g1735 602 FunFam Cryptochrome-1 376 599 - -
Dere11g1735 602 Gene3D - 207 374 - -
Dere11g1735 602 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 70 255 IPR036155 -
Dere11g1735 602 MobiDBLite consensus disorder prediction 583 602 - -
Dere11g1735 602 Pfam DNA photolyase 73 234 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1735 Dere-ChrDere11 31144390 31149604 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1735 11 31144390 31149604 Dere11g1735 11 31144390 31149604 ECH