Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1724 ATGAGCTCAGAAGCCACTCTTAAGCTTCCTGTCATAGACTTTAACAGCCTTGACTTGGAAAGCAGAAACCCTAAGTGGGAGGAAGTGAAGTCCCAAGTACATAAAGCACTTGAAGAATATGGTTGCTTTGAGGCTTTGTTTGACAAGGTTCCTTTAGACCTTCGCAAATCCTTGTTAGTTGTACTCCAAGAGCTCTTTGATCTCCCTCTTCAATCCAAGCAACGAAATCTGTCTAACAAGCCCTTTCATGGTTACGTTGGGCAATACCCTCATATCCCACTTTATGAGAGCATGGGCATTGATGATGCAAATGTGCTCGAGAAAGTAGAAAGCTTGGAGAAATTATTGTGGCCCAAAGGAAACCCCAGTTTCAGCAAAACTCTACAATCCTTCTCAGAGCAGCTATCAGAGTTGGATCAGATTGTGAGGAAGATGGTTTTGGAAAGTCTGGGGATTGAAAAGTACATGGAGGAGCACATGAACTCAACCAATTACCTTCTGAGGGTTATGAAATACAAGGGCCCTCAATCGGAAGACACAAAGCTGGGTTTAGCCTCTCACACAGATAAGAACATAGTGACCATACTGTACCAAAATGAAGTTGCTGGTTTAGAGGTTGAAACCAAAGATGGAAAATGGATCACTTATCAGCCCTCACCTCATAGTTTCGTCGTCATGATTGGCGACTCTCTCAATGCATGGACAAATGGGAGGTTGTATTCGGCATTTCACAGAGTGATGATGACAGGAAACGAGGCAAGATATTCAGCAGGACTGTTTTCAATACCAAAAGGACAATACATAATAAAAGTCCCAGAGGAGCTTGTGGATGAAGAACACCCTCTTCTATTTAAGCCCTTTGATCACGTTGAGTTCCTCAGCTATTACTACACTGAAGAGGCCCAGAGACAAAAATTTGCTTTGAAGGCTTATTGTGGTGTTTGA 945 0.4275 MSSEATLKLPVIDFNSLDLESRNPKWEEVKSQVHKALEEYGCFEALFDKVPLDLRKSLLVVLQELFDLPLQSKQRNLSNKPFHGYVGQYPHIPLYESMGIDDANVLEKVESLEKLLWPKGNPSFSKTLQSFSEQLSELDQIVRKMVLESLGIEKYMEEHMNSTNYLLRVMKYKGPQSEDTKLGLASHTDKNIVTILYQNEVAGLEVETKDGKWITYQPSPHSFVVMIGDSLNAWTNGRLYSAFHRVMMTGNEARYSAGLFSIPKGQYIIKVPEELVDEEHPLLFKPFDHVEFLSYYYTEEAQRQKFALKAYCGV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1724 314 SUPERFAMILY Clavaminate synthase-like 6 299 - -
Dere11g1724 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 293 - -
Dere11g1724 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Dere11g1724 314 Gene3D - 7 312 IPR027443 -
Dere11g1724 314 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 301 - -
Dere11g1724 314 Pfam 2OG-Fe(II) oxygenase superfamily 159 260 IPR044861 -
Dere11g1724 314 PRINTS Isopenicillin N synthase signature 187 208 - -
Dere11g1724 314 PRINTS Isopenicillin N synthase signature 223 249 - -
Dere11g1724 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1724 Dere-ChrDere11 31007409 31009339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1724 3 281 Glycosyltransferase AT5G59530 24.828 1.03e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1724 11 31007409 31009339 Dere11g1724 11 31007409 31009339 ECH