Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1691 ATGCTTGACAGATTATTGAAGCCGAAATTCTATAGAAGATGGTACAGCACTAACCCAGAAATAATGTTTTTCTTCTCCTTTGCTAGTAATGATGATTCTCTGGATTTCATTTTGAATCCGTGTTTCTGTTTTCAATTTCATTTTGGTAACAGCAAAACGTGCCTGGACTGTACAAAGTCGCGGATAGAGACGATACGGAAGAAGAGGAAAGCAGTGCAGAAGTTTCTGAAGAATGATATCGCCGATCTTCTTAGGAGTGGCCTTCACTACAATGCATATGGAAGAGCTGAAGGGTTCTTGATCGAGCAAAACTTGTCATTCTGTTATGAACTGGTTGTAAAGTTTATTGGATGCATATCAGATCATCTTCAAGTCCTTTCTAAGGAGAGGAATTGCCCGGATGAATGCAAGGAAGCTGTGCAGTCATTGATATATGCTGCTGCAAGATTTGCTGACCTGCCAGAATTGCGTGATCTCAGAACTTTTTTTAAGGAGAAATTTGGGGATTCTCTTGAACCTTACATAAGTATAGAGTTTGTGGAGAAGTTGAAGCTAGAACCTACAAAGGAGATGAAGATTCAAATCTTACACGATATATCACAAGAATTCTCTATAAAGTGGAACAGCAAGGCTATAGAGGAGAGACTCAATAGATCCTCCCCATCACTTCAAGAGAAGCCTAGACATAAGTCACTAAATATGAAGTATATCAGTGGTGAAGACTCACGGAGGCTTCAGAGCAGTAGTGATGACGAAGCAAGTACAGATATATCATCCCAGGATGGCCCAAAGACTTGTTCAAGCTCATTAGAGGACGAAGTAGAATATTACAAGAGGCCATCTCACAACAGGATTGTTCCTCCTCCTTCCCTCAATCCAAAACCTGAAAGCAAGGAGTCAAGTCATGATCTTCCTGAACCAGTTGTTCAAGAAAAACCAAAACCAAGATCAGTCAGAACTAGAGGTCTCAAAAAACCCCCATCTGGGCATGCCAATACTGTTTCTGATGGTGATTCGAGGGATGAAGAAGAAAGGATAATGGATGGGCTTTTGATGCATTACAGTCAGAAAAAATTTCCTTATGAATCCAAGGGGCAGAACACAATTAGGCACACAAAGTCCAATTCAGATGGACAGCTTACAAGAGGAACATCTCTTCCCTCTCAACTCTCAACTTCTGTAGGACCAGAAATGGCAAGTGAACCAAGAAAGCATGTGCATCCTAAGCTACCAGATTATGATGACTTAACAGCTCGTCTCGCAGCTGTCAAAGGGAGATGA 1281 0.4122 MLDRLLKPKFYRRWYSTNPEIMFFFSFASNDDSLDFILNPCFCFQFHFGNSKTCLDCTKSRIETIRKKRKAVQKFLKNDIADLLRSGLHYNAYGRAEGFLIEQNLSFCYELVVKFIGCISDHLQVLSKERNCPDECKEAVQSLIYAAARFADLPELRDLRTFFKEKFGDSLEPYISIEFVEKLKLEPTKEMKIQILHDISQEFSIKWNSKAIEERLNRSSPSLQEKPRHKSLNMKYISGEDSRRLQSSSDDEASTDISSQDGPKTCSSSLEDEVEYYKRPSHNRIVPPPSLNPKPESKESSHDLPEPVVQEKPKPRSVRTRGLKKPPSGHANTVSDGDSRDEEERIMDGLLMHYSQKKFPYESKGQNTIRHTKSNSDGQLTRGTSLPSQLSTSVGPEMASEPRKHVHPKLPDYDDLTARLAAVKGR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1691 426 MobiDBLite consensus disorder prediction 296 317 - -
Dere11g1691 426 MobiDBLite consensus disorder prediction 216 237 - -
Dere11g1691 426 MobiDBLite consensus disorder prediction 216 344 - -
Dere11g1691 426 MobiDBLite consensus disorder prediction 359 412 - -
Dere11g1691 426 Pfam Regulator of Vps4 activity in the MVB pathway 52 205 IPR005061 GO:0015031
Dere11g1691 426 PANTHER IST1 FAMILY MEMBER 51 424 IPR005061 GO:0015031
Dere11g1691 426 Gene3D - 42 216 IPR042277 -
Dere11g1691 426 MobiDBLite consensus disorder prediction 251 267 - -
Dere11g1691 426 MobiDBLite consensus disorder prediction 360 396 - -
Dere11g1691 426 FunFam Vacuolar protein sorting-associated protein IST1 45 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1691 Dere-ChrDere11 30636428 30639631 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1691 11 30636428 30639631 Dere11g1691 11 30636428 30639631 ECH