Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1642 ATGGACAGAGAAACGCAAGCTACATCATCTACATCCACATCTTCTTCATCTTCATCATCAACAAGGGCAATGACCAGCAACTCTCTCCCGCCACCTGAAGATGCTTGGCTTGATGCATGCCACAAGTTGCTGCCGTTTTGGGAGTCTCATTCCCTTTCTCACCAGTCAACAATTCCCATTTCTATATCAAGAGTCAACCAAGTTGATGCAGCTAGACTGGATGTTGAAATGTCAGCCATGTTGAAGGAACAGTTAGTTAAAGTATTCTCTTTAATGAAGCCAGGAATGTTATTTCAGTACGAAGCTGAGCTTGATGCTTTCCTTGAGTTCCTTATTTGGCGATTCTCAATATGGGTTGATAAGCCAACTCCGGGCATTGCTCTCATGAACCTAAGGTATAGAGATGAGCGTGCAATTGAACCAAGAGGAAAAGTCAGAACTGGTCTGGAGGGTCCCGGACTCACCGTTGCTCAAAAGATTTGGTATTGTATCGCAACTGTTGGTGGTCAATATATCTGGGCTCGCTTACAATCCTTCTCTGCTTTTCGTCGGTGGGGTGATTCTGAGCAGAGATCATTGGCACGCCGAGTATGGATGTTTATACAGCGTATAGAAGGAATTTATAGAGCTGCCTCATTTGGCAACCTGTTGATATTTCTTTGTACTGGAAGATATAGAAATCTTATTGAAAGAGCTTTAAGAGCTAGGCTTGTCTATGGGAGCCCAAATATGAATCGTGCTGTTAGCTTTGAGTATATGAATCGGCAGTTAGTTTGGAATGAATTTTCGGAAATGTTGTTGCTTCTTCTTCCTCTTCTTAATTCATCGTCTATGAAAAATCTCCTACGACCATTTTCAAAGGATAAATCTTCTAGTTCAGCTGAGGATGACACTGTGTGCCCTATTTGTCGATCTACTCCAACCATTCCTTTTGTTGCTCTCCCTTGTCAGCACAGATACTGTTACTACTGTCTCCGGACACGGTGTGCTGCCGCTCCATCATTTAGATGTTCCAGGTGTAGTGAGCCTGTTGCCGCTATGCAGCGGCAGAGTGGTGTCACCAATGAATTGGGGAGAAAGAAAACCCCCAGCCGCGTATGA 1101 0.4405 MDRETQATSSTSTSSSSSSSTRAMTSNSLPPPEDAWLDACHKLLPFWESHSLSHQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAIEPRGKVRTGLEGPGLTVAQKIWYCIATVGGQYIWARLQSFSAFRRWGDSEQRSLARRVWMFIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSMKNLLRPFSKDKSSSSAEDDTVCPICRSTPTIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVAAMQRQSGVTNELGRKKTPSRV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1642 366 Pfam Pex2 / Pex12 amino terminal region 74 278 IPR006845 -
Dere11g1642 366 ProSitePatterns Zinc finger RING-type signature. 316 325 IPR017907 -
Dere11g1642 366 MobiDBLite consensus disorder prediction 1 31 - -
Dere11g1642 366 SUPERFAMILY RING/U-box 292 346 - -
Dere11g1642 366 SMART ring_2 300 340 IPR001841 -
Dere11g1642 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 363 IPR013083 -
Dere11g1642 366 ProSiteProfiles Zinc finger RING-type profile. 300 341 IPR001841 -
Dere11g1642 366 Pfam Zinc finger, C3HC4 type (RING finger) 300 340 IPR018957 GO:0046872
Dere11g1642 366 MobiDBLite consensus disorder prediction 1 28 - -
Dere11g1642 366 CDD RING-HC_PEX2 297 344 IPR045859 -
Dere11g1642 366 PANTHER PEROXISOME BIOGENESIS FACTOR 2 25 356 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1642 11 30084754 30088940 Dere11g1642 11 30084754 30088940 ECH