Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1629 ATGGTGACCGAACAAAATCCACCCGAGGAGGAGAAGGTGGTGGTGGTGTTGGAGAATGGCGCAATGAGCGGCCCACTCGTCGGAGCCTCCGCCGGGATCCGCCGGAATGCTGACGCGATGCAGCTGATTCTGAGGCTGTTGTGCATGGTCAGTTCAGTCATTGCGCTTTCGTTTATGGTGACGGCCAAGCAAGCTAGCTCCGTCTCCATCTATGGTTTTCACTTGCCGGTTTACTCCAAGTGGTCCTTCGCTGAGTCGTTCGAATATCTTGTTGGTGTTTCTGCTGCTGTTGCGGCTCACTCCTTGCTGCAACTACTCATTGGCACATCTAGATTGCTGAAGAAATCCTCTGTGATTCCCTCAAGAAATCACGCATGGCTTATTTTTGCTGGAGATCAGGCATTTGCTTATTCACTGATAAGTGCTGGGTCTGCTGCATCTGGGGTGACCAATCTGAATCACACTGGAATTAGACATCCAGCTCTGCCGAACTTTTGTAAGCCTTTGCATAAATTTTGTGACCATATTGCCATCTCAATAGCCTTCACTTTCATCGGCTGCTTCCTGCTGGCTGCATCTGCTATCCAGGATGTAATATGGCTCTCCAAACACTAG 615 0.4992 MVTEQNPPEEEKVVVVLENGAMSGPLVGASAGIRRNADAMQLILRLLCMVSSVIALSFMVTAKQASSVSIYGFHLPVYSKWSFAESFEYLVGVSAAVAAHSLLQLLIGTSRLLKKSSVIPSRNHAWLIFAGDQAFAYSLISAGSAASGVTNLNHTGIRHPALPNFCKPLHKFCDHIAISIAFTFIGCFLLAASAIQDVIWLSKH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1629 204 PANTHER CASP-LIKE PROTEIN 4A4 32 200 - -
Dere11g1629 204 Pfam Casparian strip membrane protein domain 36 188 IPR006702 -
Dere11g1629 204 NCBIfam plant integral membrane protein TIGR01569 42 192 IPR006459 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1629 4 204 Miscellaneous Gene Families AT3G16300 45.366 4.11e-53 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1629 11 29945281 29947573 Dere11g1629 11 29945281 29947573 ECH