Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1621 ATGATGTTCTACGCTTATCTTGGATTTTCTGTGAAGACTTGGATTGCTAATGGAGACTATTTGTGTTGGCCTGTGTTTGCTTTATTTCCGTGTTCTCCCATCATGTCCAAGTCCGACGGCCTTCAAAGAACAATCTCAGACATATCCTACGAGATTTCCAAAGAAGGAATCGAAGATCTCAAAGCACTCCCTGCAATCTCTGAAGTTGAAGACGCCAAGTGCGAGTGCTGTGGGATGAGCGAGGAGTGCACAATGGAGTACATAGAGCGCGTGAGGGAGAAGTACTTGGGGAAGTGGCTGTGTGGTCTGTGTGCAGAGGCTGTGCAGGAGGAGCTGGAGAAGAATGGAGGGAGAAAAGAGGAGGCACTCAACGCGCACGTGAGCGCGTGTGTGAGGTTCAATAAGTATGGAAGGGCTTTCCCTGTGCTGGTTCAGGCTCAGGCCATGAAGGAGATGTTGAAGAAGAGCAAGCTCGATGGAAGAAGGGTCAAGTCCTTCAACCCAAGAGACAATGATAATAATAATAACAACAATAAGAACGGAGGGATTGCAAGGAGTTCAAGTTGCGTCGCTCAGCTATCACTTGACAGATGA 594 0.4798 MMFYAYLGFSVKTWIANGDYLCWPVFALFPCSPIMSKSDGLQRTISDISYEISKEGIEDLKALPAISEVEDAKCECCGMSEECTMEYIERVREKYLGKWLCGLCAEAVQEELEKNGGRKEEALNAHVSACVRFNKYGRAFPVLVQAQAMKEMLKKSKLDGRRVKSFNPRDNDNNNNNNKNGGIARSSSCVAQLSLDR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1621 197 Pfam Protein of unknown function (DUF1677) 69 155 IPR012876 -
Dere11g1621 197 MobiDBLite consensus disorder prediction 160 184 - -
Dere11g1621 197 MobiDBLite consensus disorder prediction 169 184 - -
Dere11g1621 197 PANTHER OS01G0745000 PROTEIN 63 193 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1621 Dere-ChrDere11 29886528 29888995 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1532 12 27856475 27857080 Dere11g1621 11 29886528 29888995 CCT
Dere11g1621 11 29886528 29888995 Dere11g1621 11 29886528 29888995 ECH