Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1595 ATGGGGGGCTCTGGAGGATTGAGAGCTACATCGCAGCCTTCCCAAGCGGTGGCGAAGCAATATGGCGTGACGAAGCCGATATCAATGGCTGGACCTGCTGTGGCTGATAAGCAAAGGACTTTGGAGTTAGAGAAGTTTCTAGTTCATTCAGGGCTTTATGAGAGCAAAGAGGAGGCTGCCAAGAGAGAAGAGGTCTTTCATCGACTTGGACAGATTGTGAAGGGTTGGGTGAAGCAACTTACCCAGCTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATATTCACATTTGGTTCTTATCGACTTGGGGTTCATGGTCGTGGGGCAGACATAGACGCATTATGTATTGGACCATCCTATGTGAACCGGGAGGAGGACTTTTTCTTTGTATTGCATGACATTCTGGCTAACATGGAGGAAGTCACAGAACTACAACCAGTTCCTGATGCTCATGTCCCTGTAATGAAATTCAAATTTGATGGAATATCAATTGACCTACTATATGCAAGTATATCTTGCTTGGTTGTTCCGGAAGACTTGGACATATCTGATGTGTCTGTGCTACACAATGTGGATGAGCCTACCGTTCGAAGTTTGAATGGCTGTAGAGTTGCTGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGCACTTTCGAACAACACTTTGGTGTATAAAATTTTGGGCCAAGAGACGAGGTGTCTATTCCAATGTGACTGGATTTCTTGGTGGTGTGAACTGGGCAATTCTTGTCGCTCGAGTGTGCCAGCTGTATCCAAATGCAGTTCCTAGTATGCTTGTCTCTCGATTCTTTAGGGTTTATACACAGTGGCGGTGGCCAAATCCCGTAATGTTATGTCCAATTGAGGAGAACGAGCTTGGATTTTCTGTCTGGGATCCTCGTAAAAATCCTCGTGACCGCACACATCATATGCCCATCATTACTCCTGCGTATCCTTGTATGAATTCTAGTTACAATGTTTCAACAAGTACACTTCGTGTAATGATGGAACAATTTCAATATGGCAACAAGATATGTGAGGAAATAGAGCTGAATAAAGCCCAGTGGAGTGCTATGTTTGAGCCGTACCTTTTCTTTGAAAGCTATAAAAACTATCTGCAAGTTGACATAGTAGCGGCTGATGTTGATGACTTGCGAACTTGGAAGGGTTGGGTGGAATCTCGACTTCGGCAACTGACTTTGATGATTGAGCGTGACACTCTTGGAAAATTGCAATGCCATCCTTATCCTCATGAGTATGTGGATGCTTCAAAGCAATGTGCACATTGTGCTTTCTTCATGGGCTTGCAAAGGAAGCAAGGGGAGATTGTTCAAGAAGGTCAACAGTTTGATATTCGTGAGACAGTAGATGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCAGGGATGAATATTAATGTTTCTCATGTTCGTAGAAGGCAAATTCCGTCTTATGTTTTACCAAATGGTTGTAAACGATCTCGACCATCAAGGCCAATGGCACAGCTAGAGAATCCTGTTAAATCTTGTCATGTAGATGAGATGTATGGGACTGAATTTGTTGTGGGAAACCGTAAGAGGAAAAATGAGGACAAGGTGGGTGAGAAGCATGATGTTACTCTGAAAAGGCAATCTATTAGTCCGCAGAGGCAAGCTTTAATTTCTTCAGACGTTATGGATAGATCAATGGATAGCTTGGGTTGTAGTACAAGACGCAAAATGTGCCAGTTTGAAGTGAGTCAAGTTTCACGTTTGGCTTCCAATGGTTTGTCTGCTGATTCCATGTCTGATAGTCAAGAGTTGAGGCATATAGAGAGCATTAAATCGTCCTACAGAGGACAAGATGATCTGGATAAAGGAATACCATCTCCTGAACAAGAACCTGAATGTGCATCAAATTCTAGTGTCATTACATCTGTTACAAGTGATGGGGGTTCTTCAGAGGATGTTGGATTTGGATCAGTGGCAAGCTGCGGTGAGGATAACACTAGGGGTATCGAGGGAATTGTCAGAGAGGGTGATGAGATGATGTCTTTGCAGGATACTGCTTATGGGGGAGATTCTCTTGCATTTTTGGAAAACGCAATTGCAAGTGGAAAAGGATTATTACAGGACGAGCTATGGAATAGTAGGAGTCAAAAGAAAGCCAGTGATAAGGAGAACGATCTTAGCATCAAAGCATGGGAGATTTGA 2214 0.4295 MGGSGGLRATSQPSQAVAKQYGVTKPISMAGPAVADKQRTLELEKFLVHSGLYESKEEAAKREEVFHRLGQIVKGWVKQLTQLRGYTDQMVEDANAVIFTFGSYRLGVHGRGADIDALCIGPSYVNREEDFFFVLHDILANMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLWCIKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELNKAQWSAMFEPYLFFESYKNYLQVDIVAADVDDLRTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHEYVDASKQCAHCAFFMGLQRKQGEIVQEGQQFDIRETVDEFRHSVNMYMFWKPGMNINVSHVRRRQIPSYVLPNGCKRSRPSRPMAQLENPVKSCHVDEMYGTEFVVGNRKRKNEDKVGEKHDVTLKRQSISPQRQALISSDVMDRSMDSLGCSTRRKMCQFEVSQVSRLASNGLSADSMSDSQELRHIESIKSSYRGQDDLDKGIPSPEQEPECASNSSVITSVTSDGGSSEDVGFGSVASCGEDNTRGIEGIVREGDEMMSLQDTAYGGDSLAFLENAIASGKGLLQDELWNSRSQKKASDKENDLSIKAWEI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1595 737 MobiDBLite consensus disorder prediction 614 661 - -
Dere11g1595 737 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Dere11g1595 737 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Dere11g1595 737 Pfam Poly(A) polymerase predicted RNA binding domain 369 426 IPR007010 GO:0003723|GO:0043631
Dere11g1595 737 SUPERFAMILY Nucleotidyltransferase 19 215 IPR043519 -
Dere11g1595 737 Gene3D - 22 364 - -
Dere11g1595 737 MobiDBLite consensus disorder prediction 634 655 - -
Dere11g1595 737 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 369 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
Dere11g1595 737 MobiDBLite consensus disorder prediction 614 630 - -
Dere11g1595 737 CDD NT_PAP_TUTase 61 216 - -
Dere11g1595 737 FunFam Putative poly(A) polymerase gamma 193 364 - -
Dere11g1595 737 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 366 - -
Dere11g1595 737 Gene3D Poly(A) polymerase predicted RNA binding domain 369 484 - -
Dere11g1595 737 Pfam Nucleotidyltransferase domain 95 171 IPR002934 GO:0016779
Dere11g1595 737 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Dere11g1595 737 PANTHER POLY A POLYMERASE 11 538 - -
Dere11g1595 737 Pfam Poly(A) polymerase central domain 22 366 IPR007012 GO:0043631|GO:1990817
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1595 Dere-ChrDere11 29559872 29564987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1595 11 29559872 29564987 Dere11g1595 11 29559872 29564987 ECH