Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1575 ATGATATTCCTCAGAACGATCTTCACTAACAAGCACCTCCTGCGTAATCCCACCAATCCCAAACGCTTTTCAGCTCCTTTTCTCATTTCCTTTCGTTCCCTTCCTAACTCTCAGTTTTCTTGTCATTCCCACTCTGCAACGAGTCCTCAGGAAGATTCGAGCTTTCGCATTGATACCCCAGAAGAACCGAAGACCAGTTTAAACGCTCATTCCAAAGATAGAAGAAATCATCCCTCTTGGTCACACTACGGTCATGTTGTTGAAGGCAATACTGATGGGCAAAAGAATGGGTTCGATTCCAGGGATAACGTTGAAGACTTTAGTAACGAAAAGGCGTATGGGAAAGTGAAGGAGGCGAACCCATTTCATCGTACCGAACAGGGTGGGGGTATTCGAAGCAGAGTTACGAGCAAGAAAAAAGAAAAAGGAAAAACGCATTGGGTTTGCTCAAATTGTGGGTATGTGTCTGGACAATGGTGGGGGATATGTCGTTCATGTAATACGTCTGGCTCGATGAAAGAGTTTCATGAAGCGAAACCTAGTGATTCTGGTAAGGTTAGTGGGTTTTCAGTTTCGGAGAATGTAGTGGGGTCGTGGCTCCCACAGGCGGCTGGTGAAGTGCGTCCCGTAAGATTAACGGATGTGAACCGTGGACTCAATCATCAAGAGTGGAGAATTCCTTTCTCTGGTCCTTTTGGAAATGAAGTTTCAAGAGTACTTGGTGGTGGTCTTGTACCAGGCTCTTTGACTTTAGTTGGTGGAGATCCTGGTGTTGGGAAGAGTACACTTTTGTTGCAGATTGCTGCAATGATAGCAGAAGGGTGTGATGGTAACAAAGCAGCTCCAGTCGTATATGTCTCTGGTGAAGAGAGTATTGAGCAAATTGGTAACAGAGCAGATCGCCTTGGGATTGAATCAGATTTATATTTATATTCAAGTACTGATATTGAGGATATATTGGAAAAAATTCAGCATCTCTACCCCCGAGCTGTAGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGAATAGCTGGAAGTGCTGGAGGGATTATGCAGGTAAAGGAATGTACTTCAGCATTGCTGCGATATGCAAAGCAGACTAACACTCCAGTATTTTTGATTGGACATGTAACAAAATCTGGAGATATAGCAGGACCTCGTGTCTTGGAGCACATTGTTGATGTTGTTTTGTACATGGAAGGGGAGAAGTACTCTTCCCATCGTATGCTTCGAGTGGTTAAAAATCGGTTTGGATCTACTGATGAGCTAGGAGTCTTTGAGATGTCACAATCAGGTCTCCAGGCTGTTTCAAATGCTAGTGAAATATTTCTCAGTAAGGAATACATAGATTCTGACTATTTAGCTGGGATAGCTGTTGCTGTCATAATGGATGGGTCTCGGGCTTTCCTAATTGAAATTCAGGCACTTTGTGTGTCTGGTTCAACAGTTTCGAGGCATGTTAATGGCATTCAATCGAGTAGAGCTGATATGATTATATCTGTTCTTATAAAGCAAGCTGGACTTCGTCTTCAAGAAAATGCTGTGTTTCTAAATGTTGTTAGTGGATTGACTCTGACTGAGACTGCTGGAGATCTTGCAATCGCAGCTGCAATTTGCAGCAGTTTCTTGGAATTCCCTGTTCCCAATTACATTGCATTCATTGGTGAAATTGGCCTCGGTGGTGAGCTCCGCACGGTTCCTAGAATGGATAAAAGGGTAAACACGTTGGCGAAATTAGGTTATAGAATGTGTGTTGTACCTAAAGAAGCTGAAAAGGCCTTAGGAACTGATGGTTTAGAGAAGATGAAACTTGTAGGTTGTCGCAATCTGAAAGAAGTTATTAACGTGGTCTTCAGAAAACACTGA 1869 0.4275 MIFLRTIFTNKHLLRNPTNPKRFSAPFLISFRSLPNSQFSCHSHSATSPQEDSSFRIDTPEEPKTSLNAHSKDRRNHPSWSHYGHVVEGNTDGQKNGFDSRDNVEDFSNEKAYGKVKEANPFHRTEQGGGIRSRVTSKKKEKGKTHWVCSNCGYVSGQWWGICRSCNTSGSMKEFHEAKPSDSGKVSGFSVSENVVGSWLPQAAGEVRPVRLTDVNRGLNHQEWRIPFSGPFGNEVSRVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAMIAEGCDGNKAAPVVYVSGEESIEQIGNRADRLGIESDLYLYSSTDIEDILEKIQHLYPRAVVVDSIQTVYLKGIAGSAGGIMQVKECTSALLRYAKQTNTPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRVVKNRFGSTDELGVFEMSQSGLQAVSNASEIFLSKEYIDSDYLAGIAVAVIMDGSRAFLIEIQALCVSGSTVSRHVNGIQSSRADMIISVLIKQAGLRLQENAVFLNVVSGLTLTETAGDLAIAAAICSSFLEFPVPNYIAFIGEIGLGGELRTVPRMDKRVNTLAKLGYRMCVVPKEAEKALGTDGLEKMKLVGCRNLKEVINVVFRKH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1575 622 MobiDBLite consensus disorder prediction 39 54 - -
Dere11g1575 622 MobiDBLite consensus disorder prediction 39 96 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 149 173 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 483 506 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 373 401 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 334 358 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 408 434 - -
Dere11g1575 622 PRINTS DNA repair protein radA signature 238 266 - -
Dere11g1575 622 PANTHER DNA REPAIR PROTEIN RADA 47 621 - -
Dere11g1575 622 Pfam AAA domain 239 382 - -
Dere11g1575 622 SMART AAA_5 246 404 IPR003593 GO:0016887
Dere11g1575 622 Pfam Subunit ChlI of Mg-chelatase 500 590 - -
Dere11g1575 622 NCBIfam DNA repair protein RadA 142 613 IPR004504 GO:0003684|GO:0005524|GO:0006281
Dere11g1575 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 429 IPR027417 -
Dere11g1575 622 MobiDBLite consensus disorder prediction 55 81 - -
Dere11g1575 622 CDD RadA_SMS_N 147 437 - -
Dere11g1575 622 SUPERFAMILY Ribosomal protein S5 domain 2-like 415 619 IPR020568 -
Dere11g1575 622 Gene3D - 456 622 IPR014721 -
Dere11g1575 622 FunFam DNA repair protein radA isogeny 453 622 - -
Dere11g1575 622 Gene3D - 235 435 IPR027417 -
Dere11g1575 622 ProSiteProfiles RecA family profile 1. 225 378 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Dere11g1575 622 Pfam Rubredoxin metal binding domain 147 174 IPR041166 -
Dere11g1575 622 FunFam DNA repair protein RadA 234 436 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1575 11 28769675 28781955 Dere11g1575 11 28769675 28781955 ECH