Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1554 ATGGGTAGTTCGGGAGACTCCAACACTAACGGAATCGATGCGTCGGTGGGTGGTTTGGTTTGGGTTCGACGCCGAAATGGGTCGTGGTGGCCTGGCAGGATAATGGGTCTTGATGAATTGTCTGAGGGCTGCTTGGTTTCGCCGAGATCGGGTACTCCAGTTAAGCTGTTAGGTCGCGACGACGCAAGTGTGGATTGGTATAATCTTGAGAAATCGAAGCGTGTTAAAGCTTTTCGTTGTGGGGAGTATGATGAATGCATTCAGAAGGCAAAGGCTGCTGCGGCAAATTCCAATAAGAAAACAGTGAAGTATGCTCGCAGGGAAGACGCAATTCTCCATGCTCTTGAGATAGAGAGTGCTCGCCTTGGCAAAGAACCATTAAACTTCTACTCTAGAGCAGACAAATCAGGTAGTGAACATGGTGATTCAGCTGGAGGATCTCCAGACACGTTTCATTCTGGTGATGACAATGAGGATGTGACTGATGATCTGAGTGATTCTGAAGACAATTCTAATTCAGCTCCAGAATTATCTCAATCTGTTATATCTTTTGAAGAGCCAAATCACAATGGCTCCTCCAAGATGCAATCTGTTCAGTGCAGAAGAAGAACCCCTAATGATTCCGAAGATGATGGAACAGAAGGAGTAAAGCGAATGAGAGGACTTGAGGACCTTGGTATAGGTGTAGGGTCAAAGAGAAAGGTCCAGGGAGCAGGGACAGCTGTTGTGGTTCAGCAAGATAGTGCTTCCCTTAACAACTTAAATACAGGAAGTTGCCTGGCAAATGGAACTTCTGTATATGGTGTTAAGGGTAATTCTTCAACACTGAAAAGGAAGAGATCACAGGTAGCAAATGTTCATGAATATTTGAAAAGGAAAAACCGACGCCGGCCTTTGACCAAGGTTTTGGAGAGTACAGCTATGGTGTCAGTTCCTGTCATTTGTGATCAGCTTCCTAGTTCAACAAGTTCTCCACATTGTGGGATATCTGATGGCGGGATTTCAGGATTAGATCCCAATGAATCAAAGAAAAGTTCTCCACTGGTAATACATAATTCGAATAGTATTGGAGTTGAATCTGAGAATGGGACAGCTCTAAATGTTCATGGACATGGCTGTGATGCTTCCCAAATCAGTCGCAATGTCAAGGAGAATGAGGCCTCAGGCATATCAGGGCTGATTGGGAATGATTCTTCTGATAAATTATTTGATGTGCCATTTGTTGGGGTTCTAGGGGAGGAGAAACATACTTCAGGTTTCTCGCCCATTCTTGGTTCTAGTTCATCTGGAAAGCCTCAAGTTGGTGGGTTGGGACAAAAATCTTGTCATGGTAGTCAATCTGAAGCTCTGTCATTGCAAAATGAGGGCCAGAATGAATCTGCTTCCACTAGTTCAGCTGCTATTCATAATACTATTGGGCATAGAGTAGAGAAAAGTAGTTCAAAGTGGCAGTCAAAAAGAAAGCGGAATTCAAGACATACAAGTAAAAATAGAAAACATGCTTCAAGAAAGTTTGTGGACATGGATGATGAACCCAGTGCTTATTTGGCTGGTACAGAAAACCCTGATGGATTTTCTCGGAGTGCTGGTCAGAAAGTTGAATTAAATATCCTACGTGTACCTGCTGCTACATACAATTGTACCTCTCAGGCAAAGTGCAAACCTGTTGCTGAAAGTCATCTTCATGGATTTCGTGACTTGAACAAGCATATCAGGGGGACAACAACTGGGGTGAAGCTGCTGCCTGATGGATCTCTCACGCCCCAAAGATCACTTCCTTATCGTCAGTCTCGCTTTACTGTCAATTCCAGATATCAAATGGCAGATTTTCCTGGTAGAAATTATTATTCTGATGCTTCATTATATGACGTTAAACTTGAAGTTAAAGCCAGCTATCGGCCACAGCATGTACCTTTGGTTTCTCTTATGAGTAAACTGAATGGCAAAGCCATTGTTGGACACCCTCTTACTGTTGAGACTTTGGACGATGGTCACTCTGATGAATTGCTGGGTGGCATCAGATGTGACTTCGAAATTGGTGACATTGGTTGTGCTGTTAAGCCTAACTCAGTAACTGGAAGAATACATTCCAAGAATTCTTCACGTTTTTCACCTAGTAAGTCTTCCAGAATAAAGAAATCCGGGCTGTTGTCTAAAAAGATCAGGAAATTGTCATCACTAACTGGCCACCGGCAATCGGAAGAGGATAGAAAACCAGTGGTGGATAAGCCCAAGGGTCCTGTTATAGCTTGTATTCCCCTTAAAGTGGTATTTAGTAGGATAAATGAGGCAGTGAATGGTCAGGCACGGCCAACACACCGTATGTTACCGACATCCAACCCTTGA 2346 0.4356 MGSSGDSNTNGIDASVGGLVWVRRRNGSWWPGRIMGLDELSEGCLVSPRSGTPVKLLGRDDASVDWYNLEKSKRVKAFRCGEYDECIQKAKAAAANSNKKTVKYARREDAILHALEIESARLGKEPLNFYSRADKSGSEHGDSAGGSPDTFHSGDDNEDVTDDLSDSEDNSNSAPELSQSVISFEEPNHNGSSKMQSVQCRRRTPNDSEDDGTEGVKRMRGLEDLGIGVGSKRKVQGAGTAVVVQQDSASLNNLNTGSCLANGTSVYGVKGNSSTLKRKRSQVANVHEYLKRKNRRRPLTKVLESTAMVSVPVICDQLPSSTSSPHCGISDGGISGLDPNESKKSSPLVIHNSNSIGVESENGTALNVHGHGCDASQISRNVKENEASGISGLIGNDSSDKLFDVPFVGVLGEEKHTSGFSPILGSSSSGKPQVGGLGQKSCHGSQSEALSLQNEGQNESASTSSAAIHNTIGHRVEKSSSKWQSKRKRNSRHTSKNRKHASRKFVDMDDEPSAYLAGTENPDGFSRSAGQKVELNILRVPAATYNCTSQAKCKPVAESHLHGFRDLNKHIRGTTTGVKLLPDGSLTPQRSLPYRQSRFTVNSRYQMADFPGRNYYSDASLYDVKLEVKASYRPQHVPLVSLMSKLNGKAIVGHPLTVETLDDGHSDELLGGIRCDFEIGDIGCAVKPNSVTGRIHSKNSSRFSPSKSSRIKKSGLLSKKIRKLSSLTGHRQSEEDRKPVVDKPKGPVIACIPLKVVFSRINEAVNGQARPTHRMLPTSNP 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1554 781 Gene3D - 5 121 - -
Dere11g1554 781 CDD PWWP 17 86 - -
Dere11g1554 781 SUPERFAMILY Tudor/PWWP/MBT 14 119 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 131 219 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 419 523 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 167 202 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 485 500 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 420 470 - -
Dere11g1554 781 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Dere11g1554 781 PANTHER T17B22.17 PROTEIN-RELATED 1 779 IPR044679 -
Dere11g1554 781 Pfam PWWP domain 18 105 IPR000313 -
Dere11g1554 781 MobiDBLite consensus disorder prediction 325 346 - -
Dere11g1554 781 MobiDBLite consensus disorder prediction 203 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1554 Dere-ChrDere11 28412844 28418902 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1554 11 28412844 28418902 Dere11g1554 11 28412844 28418902 ECH