LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g1457	ATGGTGTCTAGCTCAAGAATGGAGGGTGGCACTCAGGTACTGCCTGCTAGAGTGCGCAAAACCATCCAATCCATCAAAGAAATCGTGGGTAATCATTCTGATGCTGATATTTATGTGGCCCTTAAGGAAACCAACATGGATCCTAATGAAACCGCCCAGAAATTGCTCAACCAAGATACATTCCATGAAGTGAAGAGAAGGAGAGACAGAAAGAAAGAGCCTCAGAGTGTTGGGTACAAGGGTACAGCTGAACCACAAAAGCATTCTGACAATGTTGGTCAAGGAATGAAGTTTCATGCTCGTTCTGAACGCAATGCTCAAAGAATAAGCAATTCTCGAAATACTTTACCTGGCATCAGCAGAGAATTTCGTGTTGTCAGAGACAACAGAGCAAATCATATATATAAAGAAGTGAAGCCTCCTTCAATGCAATGTTCAACATCCACCAATGAGCAATTAACTTCATCTGAAAGAGGCTCATTAGCAGTCTCTCACTATCAAAGATCATCTGGCGCCAGAAATTCATCTCAGATTCCAGATGGTCCTTCTGAATCTCATCCTAGATACTCAGGAGATGCTGTTTCAAATGCCATTGACAGAAAAGTTACGTCTGAGGAGAAGCAAGGTATGACTCTGAATGAAGCAATGCAGTTGCAGCCAGTTAAGCCCAACATTGTCCATCAAAATTCTGCAATATTAGCGTCGGCTAGTTCTGCTGTTGGGGTTTATTCCTCTTCAACCGATCCAGTTCATGTGCCTTCGCCTGATTCCAGATCATCAGGTGTTGTTGGAGCAATTAGACGTGAAGTAGGGGTCGTTGGTGTTCGGCGGCTTTCATCAGACAACTCATTGAAACAATCACCTGTTCCTAGTAGTTCTTATGCTAACTCACTTATGGGAAAAGATGGTACCTCCACAAATTCATTTCAATCATTTAATACCATCTCAAAGACTGAACAATTTAGTCAAACTAATGTAACTGAACCTTCATTGCCCGGCATGCCAGTTAGTAGATCATTCTTGAACAATCAGTATAACAGTAGTAGGCAACATCAGCAACTCGTGGGATATCAGAGAGTATCACAGCAAAATAAAGAGTGGAAACCTAAATCAAGCCAGAAACCAAATGGTAACAATATTGGAGTGATTGGAGCACCTAAAAAACCTGCTTCTCCTGCAGAAAAATCTGAAGATATAGAATCAGACACAGCAAAGCTTCAAGGGAAACTTTCACAAGTAAATATATTTGAGAACCAAAATGTGATCATAGCAAAGCATATTCGTGTTCCAGAGACTGATCGTTGTCAGTTGACTTTTGGCACCATTGGGACTGACATTGATTCTTCTAGGCATCATTCTAATTGTCAACCAATAGAAAGTACTGAACCATCAAACGAGGAGTCTGTAGCAAGCTTGTCATTACCCACGCCAGAGTTGTCCAATGATGATGTTTCTGGCAGCAAGCAAGTGGACTTACAGGATGACCACATTCGAAGTACTGGGCCTGACTCTCCAGCATCTGGCGCTGCTGCTGAGCAACAATTGCCAGATAACAAAGAATCTTCGAGACCTCATAATCTTGACAATTATGCTGATATTGAACTGGTACAAGACAATAGGCTGTCTTATGCACCTTCAGAATCACAGCAGCAGCAAGACTCTCACGATATGCCAGGCTTCTCTGCATACGATCCCCCTACTGGTTATGACATACGCTATTTCAGACCCTCGACAGACGAAACTTTACGAGGGCAAGGTCTGCCATCTTCTCAGGAGGGTTTTAACTCCCATACAGCCAATAATATTTCAGCTTCTTCAATTCCCATGGTGCAACAACAACCTCCGGTGGCACAGATATATCCACAAGTTCATGTTTCGCATTTCTCTAATATTATGCCATTTCGTCAGTTTGTATCCCCAGTATATGTTCCACCAATGCCCATGCCTGGATATTCAAGTAATCCTCCCTATCCTCATCCATCAAATGGCAGTAGTTACTTGTTGATGCCTGGAGGTAGTTCTCATCTAAATGCCAACAGCATTAAGTATGGGGTTCAACAGTTCAAGCCTCTTCCTTCCGGAAGTCCTACTGGGTTCGGAAATTTTACAAATCCAACTGGGTATGCCATGAATGCTCCTGGTTTGGTTGGGGGTGCAACTGCTCTAGAAGACTCGTCTCGAATCAAGTACAAAGATAATCTTTATGTCCCAAACCCTCAGGCTGAGACATCAGAAATCTGGATACAGAACCCAAGGGAGCTTCCCAGCATGCAATCTGCTCCATACTATAACTTGCCGGGTCAAACTCCACATCATGCAGCTTACATGCCATCGCATGCCGGCCATGCCTCCTTCAATGCAGCTGCAGCAGCAGCTCAATCCTCTCACATGCAGTTCCCAGGTATGTATCACGCTTCTCCTCAGCCAGCTGCTATGGCTAGTCCTCATCACCATTTAGGACCAGCTATGGGCAACAATGTTGGAGTTGGAGTGGCTGCAGGTACACCTGGAGCTCAGGTTGGTGCATATCAGCAACCCCAAATGGGTCACCTCAACTGGACAACAAATTTCTGA	2574	0.439	MVSSSRMEGGTQVLPARVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETAQKLLNQDTFHEVKRRRDRKKEPQSVGYKGTAEPQKHSDNVGQGMKFHARSERNAQRISNSRNTLPGISREFRVVRDNRANHIYKEVKPPSMQCSTSTNEQLTSSERGSLAVSHYQRSSGARNSSQIPDGPSESHPRYSGDAVSNAIDRKVTSEEKQGMTLNEAMQLQPVKPNIVHQNSAILASASSAVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRRLSSDNSLKQSPVPSSSYANSLMGKDGTSTNSFQSFNTISKTEQFSQTNVTEPSLPGMPVSRSFLNNQYNSSRQHQQLVGYQRVSQQNKEWKPKSSQKPNGNNIGVIGAPKKPASPAEKSEDIESDTAKLQGKLSQVNIFENQNVIIAKHIRVPETDRCQLTFGTIGTDIDSSRHHSNCQPIESTEPSNEESVASLSLPTPELSNDDVSGSKQVDLQDDHIRSTGPDSPASGAAAEQQLPDNKESSRPHNLDNYADIELVQDNRLSYAPSESQQQQDSHDMPGFSAYDPPTGYDIRYFRPSTDETLRGQGLPSSQEGFNSHTANNISASSIPMVQQQPPVAQIYPQVHVSHFSNIMPFRQFVSPVYVPPMPMPGYSSNPPYPHPSNGSSYLLMPGGSSHLNANSIKYGVQQFKPLPSGSPTGFGNFTNPTGYAMNAPGLVGGATALEDSSRIKYKDNLYVPNPQAETSEIWIQNPRELPSMQSAPYYNLPGQTPHHAAYMPSHAGHASFNAAAAAAQSSHMQFPGMYHASPQPAAMASPHHHLGPAMGNNVGVGVAAGTPGAQVGAYQQPQMGHLNWTTNF	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	134	192	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	443	526	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	57	93	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	351	379	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	544	566	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	351	401	-	-
	Dere11g1457	857	SUPERFAMILY	UBA-like	15	75	IPR009060	GO:0005515
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	279	302	-	-
	Dere11g1457	857	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	857	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	59	77	-	-
	Dere11g1457	857	Pfam	GBF-interacting protein 1 N-terminal	15	73	IPR009719	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	141	183	-	-
	Dere11g1457	857	MobiDBLite	consensus disorder prediction	443	487	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g1457	Dere-ChrDere11	26764447	26772100	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere11g1457	11	26764447	26772100	Dere11g1457	11	26764447	26772100	ECH