Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1380 ATGAGCAGATTTGCTGATTCATTTAACGGTGACTTGAACATTCTGTTCAACTTTCCTGAAACAATGGAGAAATTCATGTTTCATCATGGAGCTCGCGATTCCCAAGACAGCAGAGGAGTGTCTAACATCCCTGTGGACGTTCTGGAAACTCCCAAAGACTATGTATTTTACATGGACGTCCCTGGTCTCTCCAAATCCGACATTCAGGTGACAGTGGAAGATGAGAACACACTAGTCATTCAAAGCAACAGGAAGCGAAAACGCGAAGAGGGCGAAGACGAAGGGTGCAAGTTCCTGAGGATGGAGAGGAGAGCACTCCAGAAGCTGCAGAGCAAGTTCCGATTGCCTGAGAATGCCAATGTAGGAGCCATCACTGCGAAATGCGAGAATGGAGTTCTGACTGTGGTTGTTGAGAAGCACCCTCCACCTCCAAAATCCAAAATTGTTGAAGTCGCCATTGCCTAA 465 0.4688 MSRFADSFNGDLNILFNFPETMEKFMFHHGARDSQDSRGVSNIPVDVLETPKDYVFYMDVPGLSKSDIQVTVEDENTLVIQSNRKRKREEGEDEGCKFLRMERRALQKLQSKFRLPENANVGAITAKCENGVLTVVVEKHPPPPKSKIVEVAIA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1380 154 Pfam Hsp20/alpha crystallin family 47 151 IPR002068 -
Dere11g1380 154 SUPERFAMILY HSP20-like chaperones 14 147 IPR008978 -
Dere11g1380 154 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 36 154 IPR002068 -
Dere11g1380 154 FunFam 17.4 kDa class III heat shock protein isoform A 6 152 - -
Dere11g1380 154 Gene3D - 2 153 IPR008978 -
Dere11g1380 154 CDD ACD_sHsps-like 46 139 - -
Dere11g1380 154 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 150 IPR031107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1380 Dere-ChrDere11 25675118 25676382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1380 11 25675118 25676382 Dere11g1380 11 25675118 25676382 ECH