Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1360 ATGGATGCTCAACAAAAGACTTTCTCTGAGGTTGTAAGCATTATCAAGTCTTTGATTCCCTGGCGATCTCAATCTGAACCAGCAAATGTGTCCAGGGATTTTTGGATGCCCGACAAGAGTTGTAGGGTATGCTATGAGTGTGATTCTCAGTTCAACTTATTTAATCGCAGACACCATTGTCGCCATTGTGGCCGAGTTTTCTGTGCCAAGTGTACAGCAAACTCGGTTCCTGCCCCACCTAGGGGCCAATGCAATTTTTCAGATGAGAGGGACAGGATTCGGGTATGCAATTACTGTTACAAGCAATGGGAGCAGGGCTTTGCTAGTTGTTATAACAGTATTCAGGCCCCCAATCTAGATCATAGTTCTTCACTATCAACATCAAGCTTGGCCAGCACTAAATCCAGTGTCACTGCTAATAGTAGTAACATTACTCTTTGCTCCCAGCCTTTATCTACTGGGTCATATCAACAAGTGCAGCAGGCTTCTGGTCTGAGTCTGCATCAATCATCTGTCAAGGGAAAAGGAATTGATAAGGAAGGTTTATCAGCACTTAGAAGGAGCAATGATCCTGTGGCAGACATAGGGAATCCATTGCCTAAGCAATACAAATACTCGATGAACAGGAGTGATGATGATGAGGATGAGTATGGTGTGTTCCAATCAGATTCTGTAATGAGGCATTTTTCTGGAGCCAATGGCTACTATTGTCAGGCTGAGTTTGATGAAATTAACAACTTCGATGGATCACAAGTGCATCCTGATGGAGAAAACATCAATGCAAAAGTTCTGTGCAACTCTTCAGAGCACCAATGCTTTGACATGCAGGGTTTGGAAGAAATCCCAGCTACAATAAAAAATGACGATGAGCCTGATATCTTTGATGAAAGTGAAGCACCTTCCTCTTTATATGTTTCAGAGGACATTGTTGCTGAACCTGTAGATATTGAAAACAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAAGAAGATGAACAAGAAGCTATGCTGTTTGAAGATGATGATGATGATGATGATTATGGGAATGACACAGGAGAATGGGGATATGCACGCACGCCAAGCAGCTTGGGAAGTGAGGAGTACCGCAATAGAGATAGGTCATGTGAGGAGCAGAAGATGGACACCAAGAATGTAGTTGATGGGCATTTTAGGGCCCTGGTAGCTCAGCTGTTACAAGTTGAAAACCTACCTATCGAAGAAAATGACACCAACAGTTGGTTTGAGATCATCACTTCTCTGTCATGGGAGGCCGCTACACTATTGAAACCAGATATGAGCCTAGGTGGAGGAATGGACCCTGGTGGATACGTGAAAGTTAAATGCATAGCATGTGGGAACCGCAGTGATAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGAAATCACAAGTAGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTTGAGTATCAACGTGTTACCAATCTCTTTTCTAGTGTAGATACTCTCTTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTGCACACCATCCTGACATCCTTTTGGTAGAGAAATCAGTTTCTCGATATGCACAGGAATATCTTCTTGCCAAAGGGATATCATTGGTTCTTAATGTCAAAAGGCCACTTCTGGAGCGCATAGGTCGCTGCTCCGGAACTCAAATAGCACCTTCAATTGATCATCTATCATCACAAAAGTTGGGCAGTTGTGAAACATTTCATGTGGAAAAGTTTTATGAAGAAATATGTAGTGCTGGCCATGGAGGGAAAAGAACAACGAAGACATTGATGTTTTTTGAAGGCTGCCCTAAACCATTGGGTTTCACGATTTTACTTAGAGGTGCTGATAAGGATGAATTGAAGAGGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCCCTGGAGACATCTTTTCTTGCTGATGAAGGAGCCTCACTGCCAGAATTCCCTTTGAATGGTCCAATAACTGTGGCCCTTCCAGATAAACCATCAAGTATTATGAGGTCCATCTCAATAGTGCCTGGTTTCCTCTTTCCTGGCAATGAAAATTCTCAGGGACCTGAACCTGGCACTGAACTACAGAGAGCCAAAAGTATCTCAGTTGCTGATCTAGCCTCATTTCTCTGCAGTAAAGAAACCTGTTTGTCTGATGGTCTTTACCAATCTATGAAACAAGGTTCAAGTCTCAGCCATTCAACTACATTTTACCCCTCTCATGTTTCTTCAGTAAATTCAATTTCCGATTATAAGAAGTTCCTCCCTTGTACTAGTCAAGAAATAAATGAAGTGGACTCCAAAATATCTCCAGTGCCAGAAACTTCTGTAGTGAACAACTCTGTAGCAATTATGGATAATTATCCTTCTGTAAATGACTGTTGGACTTCAGATAAAATGGAACAAAACATTTTGGCTGACCCTTGTCAGAACATGCACAGCCAAATGTCTACGAAACTACTGAGTTCTTCAGAGCTGTTACCCTTAGAAGTTGTTCAAAACGATTCCAAAGAGACAGGAACAGTGAATGAAGAGCCATTACCTGTAAAAGAAGAGTTTCCTCCATCACCTTCTGACAATCAAAGTATTTTGGTGTCTTTGTCCTCCCGATGTGTATGGAAGGGAACAGTGTGTGAGAAGTCCCATCTTTTTCGTATTAAATACTATGGAAGCTTTGACAAACCTTTGGGTCAGTTTTTGCGGGACCATTTATTTGATCAGAGTTATCAATGCAATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGTTATACTCATCGGCAGGGAACCCTCACTATATCAGTTAAAAAACTACCGGAAATTTTCCTACCTGGTGAAAAGGATGGGAAGATATGGATGTGGCACAGATGCCTGAAGTGTCCAAGAATGAATGGTTTTCCTCCTGCTACGCACAGAATAATAATGTCTGATGCCGCTTGGGGATTATCATTTGGGAAATTTTTGGAGCTCAATTTCTCAAACCATGCTGCAGCGAGCAGGGTGGCAGGCTGTGGCCATTCTTTACATAGGGATTGTCTTCGTTTTTATGGATTTGGCAATATGGTTGCTTGTTTTCGGTATTCATCAATTAATGTTCTCTCAGTCTACCTTCCCCTGCACAAACTGGATTTTGATCATGCAAATCAGGAATGGATACAAAAAGAAGCAGATGAGGTGGTCAACCGGGCAGAGCTTCTATTTTCGGAGGTACTCATTGCTCTTAGTCAGATTGGAAAGGAAAGGACTAGTGCAACAACAGCTAGTAGTGGACTTAAAACTGCTGAATCTAGGCGCCAAGTTGCTGAACTGGAGGGAATGTTGCAAAAGGAGAAAGTCGAATTTGAGGAGGCACTTCATAAGATTTTAAACCACGAAAGGAGAAAAGGTCAACCTATGGTTGACATTCTAGAAATTAATCGGTTGCGGAGGCAGTTAGTTTTCCAATCATATATGTGGGACCACCGCCTTATCTATGCAGCCGGATCAGTTAATGATAGCAACCAAAGTGGTTTAAGCAGTTCAATTTCAGAGGACAAAGAGAGACCAATGGATGAAAAATTGAAAAGTGCGGTGTCCATGCCAGGAGGCTTCAGCAGTACTGACTGTATTCTTATGGATTCAAAGCTTAACAAAAGCTCTGACCTGGGAGGAGAAGAAGGATCTGATAGCAAAATTACCCAACCTCATGCATTTTATCAAGAAAGTGAAATGGCCAAAGATACAAAACATAAGAAAGAGGATCAATCAGACCCCTCAGAACTTGGGTTAGGCATTCGCAGAGCTCTCTCTGATGGGTTTTATCCTGCCGTGCCTTCTTTGTCTGATACCCTTGAGGCAAAATGGACAGGTGAAAAACATTCAGGGTTTGTAATACCAAAGGATAGCACTTCTGTAACTCTTGATGCATTTATGGCAGATTCCTTGGCCTCCACTATACACAGAGAAGTGTCCAATCAAGGGAATCATGCAGAAGACCAAAATGGCCCCAAGAATACCTATCCTGCTTCGAAGGGACATGACATTATGGAAGACTCTTTAAGCTGGCTAGGAATGCCGTTCTTAAACTTCTATCGTTCATTTAACAAGAATTTTTTAGCCAATACGCAAAAGTTTGATACACTAGTTGACTACAATCCCGTTTACGTGTCATCTTTCCGGGAAATGGAACTCCAAGGTGGAGCAAGGCTGCTCCTTCCAATTGGTGTTAATGACACTGTAATACCAGTGTTTGATGATGAGCCCTCAAGTATTATATCATATGCTTTAATGTCACAAGAATATCATGCCCAAGTGAATGATGAAGGAGAGAGAACAAAAGATGGAGTTGATGCAATATCTTCATTATATCTTTCTGACTCAGGGAACTTCCAGTCATTCCTTTCTGCTGATGAAACAAATTTTGATTCTCAGAGAAGTTTTGTGTCAACAGAGGATATGTTAACATCCTTGTCTGCCTCTCGTAGCTCATGGATGGCAGATCCACTGGTATATACAAAGTCTATGCACGCCAGAGTTTCCTTTGGAGATGATGGTCCCCTTAGTAAGGTCAAATATACTGTGACTTTTTACTACGCCAAGCGTTTTGAAGCCTTAAGAAGGGTTTGTTGTCCTTCAGAACTTGACTATATAAGGTCTTTGAGTCGCTGTAAAAAATGGGAAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACTTTGGATGATCGATTTATCATCAAACAAGTCACCAAAACAGAGCTTGAATCATTTATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAGTCAATAGGCTCAAGAAGTCCAACATGCCTGGCAAAGATTCTAGGGATATACCAGGTTACAGTAAAGCATCTTAAAGGAGGGAAAGAATCCAAGATAGATGTCCTGGTTATGGAGAATCTTCTGTTTAAGAGGAGTGTAGCACGGCTTTATGATCTCAAAGGATCTTCCAGGTCTCGGTATAATCCAGATTCTAGTGGGAGTAACAAAGTTCTGCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCCATTTTTGTGGGAAATAAAGCAAAACGGTTGTTAGAGAGAGCTGTCTGGAATGATACTGCTTTTCTTGCATCAGTTGGCGTAATGGACTACTCATTACTTGTTGGGGTAGATGAAGAGAAGCATGAGTTAGTTATTGGAATTATTGATTTCATGAGACAGTATACATGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCTGGCATCCTTGGAGGGCCAAAGAATTCATCTCCAACAGTAATATCACCCAAGCAATATAAGATAAGGTTCCGGAAAGCAATGACCACATATTTTCTCATGCTTCCAGATCAGTGGTCTCCTTCATCTATTGTTCCTAGTAAATCCCAGTCTGATTTATGTGAAGAGAGCACACAATCTAATTCAATTGAATGA 5505 0.4167 MDAQQKTFSEVVSIIKSLIPWRSQSEPANVSRDFWMPDKSCRVCYECDSQFNLFNRRHHCRHCGRVFCAKCTANSVPAPPRGQCNFSDERDRIRVCNYCYKQWEQGFASCYNSIQAPNLDHSSSLSTSSLASTKSSVTANSSNITLCSQPLSTGSYQQVQQASGLSLHQSSVKGKGIDKEGLSALRRSNDPVADIGNPLPKQYKYSMNRSDDDEDEYGVFQSDSVMRHFSGANGYYCQAEFDEINNFDGSQVHPDGENINAKVLCNSSEHQCFDMQGLEEIPATIKNDDEPDIFDESEAPSSLYVSEDIVAEPVDIENNGLLWLPPEPEDEEDEEDEQEAMLFEDDDDDDDYGNDTGEWGYARTPSSLGSEEYRNRDRSCEEQKMDTKNVVDGHFRALVAQLLQVENLPIEENDTNSWFEIITSLSWEAATLLKPDMSLGGGMDPGGYVKVKCIACGNRSDSVVVKGVVCKKNVAHRRMKSQVDKPRLLILGGALEYQRVTNLFSSVDTLLQQEMDHLKMAVAKIAAHHPDILLVEKSVSRYAQEYLLAKGISLVLNVKRPLLERIGRCSGTQIAPSIDHLSSQKLGSCETFHVEKFYEEICSAGHGGKRTTKTLMFFEGCPKPLGFTILLRGADKDELKRVKHVVQYGVFAAYHLALETSFLADEGASLPEFPLNGPITVALPDKPSSIMRSISIVPGFLFPGNENSQGPEPGTELQRAKSISVADLASFLCSKETCLSDGLYQSMKQGSSLSHSTTFYPSHVSSVNSISDYKKFLPCTSQEINEVDSKISPVPETSVVNNSVAIMDNYPSVNDCWTSDKMEQNILADPCQNMHSQMSTKLLSSSELLPLEVVQNDSKETGTVNEEPLPVKEEFPPSPSDNQSILVSLSSRCVWKGTVCEKSHLFRIKYYGSFDKPLGQFLRDHLFDQSYQCNSCEMPSEAHVHCYTHRQGTLTISVKKLPEIFLPGEKDGKIWMWHRCLKCPRMNGFPPATHRIIMSDAAWGLSFGKFLELNFSNHAAASRVAGCGHSLHRDCLRFYGFGNMVACFRYSSINVLSVYLPLHKLDFDHANQEWIQKEADEVVNRAELLFSEVLIALSQIGKERTSATTASSGLKTAESRRQVAELEGMLQKEKVEFEEALHKILNHERRKGQPMVDILEINRLRRQLVFQSYMWDHRLIYAAGSVNDSNQSGLSSSISEDKERPMDEKLKSAVSMPGGFSSTDCILMDSKLNKSSDLGGEEGSDSKITQPHAFYQESEMAKDTKHKKEDQSDPSELGLGIRRALSDGFYPAVPSLSDTLEAKWTGEKHSGFVIPKDSTSVTLDAFMADSLASTIHREVSNQGNHAEDQNGPKNTYPASKGHDIMEDSLSWLGMPFLNFYRSFNKNFLANTQKFDTLVDYNPVYVSSFREMELQGGARLLLPIGVNDTVIPVFDDEPSSIISYALMSQEYHAQVNDEGERTKDGVDAISSLYLSDSGNFQSFLSADETNFDSQRSFVSTEDMLTSLSASRSSWMADPLVYTKSMHARVSFGDDGPLSKVKYTVTFYYAKRFEALRRVCCPSELDYIRSLSRCKKWEAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGSRSPTCLAKILGIYQVTVKHLKGGKESKIDVLVMENLLFKRSVARLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASVGVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNSSPTVISPKQYKIRFRKAMTTYFLMLPDQWSPSSIVPSKSQSDLCEESTQSNSIE 1834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1360 1834 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 38 104 IPR017455 -
Dere11g1360 1834 MobiDBLite consensus disorder prediction 858 877 - -
Dere11g1360 1834 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1578 1744 IPR002498 GO:0016307|GO:0046488
Dere11g1360 1834 MobiDBLite consensus disorder prediction 1812 1834 - -
Dere11g1360 1834 SMART PIPK_2 1512 1803 IPR002498 GO:0016307|GO:0046488
Dere11g1360 1834 MobiDBLite consensus disorder prediction 1340 1359 - -
Dere11g1360 1834 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 460 633 - -
Dere11g1360 1834 SUPERFAMILY SAICAR synthase-like 1533 1802 - -
Dere11g1360 1834 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 26 110 - -
Dere11g1360 1834 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1504 1659 - -
Dere11g1360 1834 MobiDBLite consensus disorder prediction 326 355 - -
Dere11g1360 1834 Gene3D GroEL 460 633 IPR027409 -
Dere11g1360 1834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 108 IPR013083 -
Dere11g1360 1834 Coils Coil 1123 1150 - -
Dere11g1360 1834 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1492 1659 IPR027484 -
Dere11g1360 1834 MobiDBLite consensus disorder prediction 1340 1356 - -
Dere11g1360 1834 Pfam FYVE zinc finger 35 103 IPR000306 GO:0046872
Dere11g1360 1834 SMART fyve_4 30 105 IPR000306 GO:0046872
Dere11g1360 1834 Pfam TCP-1/cpn60 chaperonin family 412 657 IPR002423 GO:0005524
Dere11g1360 1834 CDD Fab1_TCP 396 667 - -
Dere11g1360 1834 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1478 1802 IPR002498 GO:0016307|GO:0046488
Dere11g1360 1834 SUPERFAMILY GroEL apical domain-like 461 633 IPR027409 -
Dere11g1360 1834 CDD PIPKc_PIKfyve 1539 1802 IPR044769 GO:0000285
Dere11g1360 1834 MobiDBLite consensus disorder prediction 320 382 - -
Dere11g1360 1834 SUPERFAMILY FYVE/PHD zinc finger 33 107 IPR011011 -
Dere11g1360 1834 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 6 1815 - -
Dere11g1360 1834 Gene3D - 1661 1803 - -
Dere11g1360 1834 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1661 1803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1360 Dere-ChrDere11 25429401 25438499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1360 2 1832 EF-hand Containing Proteins AT3G14270 58.687 0.0 2008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1360 11 25429401 25438499 Dere11g1360 11 25429401 25438499 ECH