Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1358 ATGGATCTCCCCAACCACAAATTCTTTCAAGCTTCATCTCTGATATCATCACATGGGGAATCACCATTAGAGGGCAAAATAGACTTGTTTGGCAGAAGTAAAGAAAACCCATTTGAGAACTCATTCCCAGACCCACTTTGTGAGCTCAATCTCAGGGAGACGTCTGAGTTTGTCAAGTCATTTCCAATGTCAAATGGTGGAAGCACAGAAAGCAGAGGCTGCTTTCTTCAGGGTTCAGCACAGAGGAGAGAAGAAGGTTCCAACTCTGTCACAAATAGGAGATTAGAGACTCCCTCAACTCCTGGTAGACCGGTTTTCTGCTTCACCAGCGTTGGAAATCTTTCAAGGAAGAGCTTTCCTTCAAAATGGGATGATGCTGAGAAATGGCTCATGGGCAGCTCTTGCCATGACTCTCCTGCTCATACTGTGAAGGTATCAGAAGCTTCCAAGATTAGCAGACAATGTGATGACTTACAGAAACAAACGGAGGATTTCTCGGAGAAATCGAGGGTCACGGAAGAAAGGGTGTCCAAAGCTGTCCCAAGCTTTCAAGGGTCTGTGTCTTTGGACCACCATAACACAGATACGGTGCTAAAAGATAAGTTCACAGACAACCCAGCGCCCATTCGGCCTAATCTCAGATATTCAGAGCCAACCAAAGAAGCGTTTCTATTCAGAAACCCTGGTGGTGAGGCGATGAAAGATGCTGGCACAGAAATGGTTCACGAGGTACAACACAGAGATGTTGGGACAGAGATGACTCCTCTTGGAAGTTCAACCACTTCAAGGTGCCACACACCCTTCAAGAGCTCATCCCCTGCTCGCCATAACACACCTGCTAGTCGGTCAGGACCATTGGCCCTGGCAAACCAAAACGACGCTGGCTGTACTATTGATGTTATTCAGCTCGAGGAGTGCCATTTTGCTAAGTTGCAACTGGGAACACAGTATGATTCAGTCACATCAAATTGGAGCTCAAGGGAGGAGGAGGAAGAGGAGATATCAAAGAGCCTGAGGCATAATCCCAGCCAGAAAGCTGATTCAGACTGCAGAGCTGCTACATGGGAAGAGGAGGTAAAGACCAAGTGTTGCCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTTAATCTCCAAAGTGCAAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAAATCAAACCTGGAAGAGAAATTGATGAAGAGGATGGCAGTTGTTCACAGAAAAGCTGAGGAATGGAGAGAAGCAGCGAAGCAGCAGCACCAGGAGCAAATCCAGAAGGCCACTGAACAAGCACAGAAGATGATGAACCACCATAAGCCACAGTTTTCAAACCGCACTTCGTGTGGTTGCTTCCCCTGCAATAATAACAGCCATCACTAA 1407 0.4648 MDLPNHKFFQASSLISSHGESPLEGKIDLFGRSKENPFENSFPDPLCELNLRETSEFVKSFPMSNGGSTESRGCFLQGSAQRREEGSNSVTNRRLETPSTPGRPVFCFTSVGNLSRKSFPSKWDDAEKWLMGSSCHDSPAHTVKVSEASKISRQCDDLQKQTEDFSEKSRVTEERVSKAVPSFQGSVSLDHHNTDTVLKDKFTDNPAPIRPNLRYSEPTKEAFLFRNPGGEAMKDAGTEMVHEVQHRDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLALANQNDAGCTIDVIQLEECHFAKLQLGTQYDSVTSNWSSREEEEEEISKSLRHNPSQKADSDCRAATWEEEVKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMKSNLEEKLMKRMAVVHRKAEEWREAAKQQHQEQIQKATEQAQKMMNHHKPQFSNRTSCGCFPCNNNSHH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1358 468 Coils Coil 382 409 - -
Dere11g1358 468 PANTHER OS02G0116800 PROTEIN 71 459 - -
Dere11g1358 468 MobiDBLite consensus disorder prediction 319 345 - -
Dere11g1358 468 MobiDBLite consensus disorder prediction 79 98 - -
Dere11g1358 468 MobiDBLite consensus disorder prediction 252 286 - -
Dere11g1358 468 CDD UDM1_RNF168_RNF169-like 386 443 - -
Dere11g1358 468 MobiDBLite consensus disorder prediction 251 286 - -
Dere11g1358 468 Pfam Remorin, C-terminal region 351 448 IPR005516 -
Dere11g1358 468 Coils Coil 426 446 - -
Dere11g1358 468 MobiDBLite consensus disorder prediction 324 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1358 Dere-ChrDere11 25406531 25410295 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1358 11 25406531 25410295 Dere11g1358 11 25406531 25410295 ECH