Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1354 ATGATGCGGAAATTCGTTATACACAGAGTGAGGAGCCTTCTGAGCCGTTCACTTCAGCATCAGCATCGTTCACCCTCCCCATTACTTCACTCACGTCTCTCTTCTGCTACTTCTTCTGCTATTGATTTTGATCCTTCTTCAATGGCTTCCTCTCCTTCTGATTCTTCCTTCCCTGTCACTGCCAGCAACATCAATCCCAAGGTTCTAGAATGTGAGTATGCTGTCCGAGGAGAGATTGTCACTCTTGCTCAGAAATTGCAACAAGAGTTACAGACCAACCGTGGCTTTCATCCTTTTGATGAGATACTTTACTGCAACATTGGGAATCCTCAGTCTCTTGGCCAGCAGCCTATTACATTTTTCCGAGAGGTTCTTGCATTATGTGACCATCCAGCCATTTTGGACAGAAGTGAAACACAGGGACTGTTCAGTGCTGATGCAATAGAGAGAGCTCGGCAGATTCTGAACCAGATTCCTGGTAGAGCAACTGGTGCCTATAGTCATAGTCGGGGTATCAAGGGCCTGAATGATGCAATAGCTGCTGGAATAGAAGCCCGTGATGGTTTCCCGGCTGATCCGAATGACATTTTTATGACAGATGGTGCAAGTCCAGCGGTCCATATGATGATGCAGTTGCTCATAAGATCAGAAAATGATGGCATTCTTTGCCCCATCCCTCAGTACCCTCTGTACTCGGCCTCAATTACCCTCCATGGTGGCACTCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGATTGGAAATATCTGAGCTGAAGAGGCAGTTGGAGGCTGCGAAATCCAACGGTATAAGTGTTAGGGCTTTGGTAGTAATAAATCCGGGAAATCCAACAGGACAGGTTCTTTCTGAGGAAAACCAGCGAGATATTGTACAATTTTGCAAGCAAGAAGGACTCGTTCTTTTGGCAGACGAGGTATATCAAGAAAACGTGTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTAACTCGGTCCATGGGGTATGGTGAGAATGATATCTCCTTGGTATCCTTCCAATCAGTCTCCAAAGGCTATTATGGAGAGTGTGGGAAACGAGGAGGTTATATGGAGATCACTGGATTTTCTGCAGATGTGAGGGAACAGATATACAAAGTGGCATCTGTGAATCTTTGTTCTAATACCTCTGGTCAAATTCTTGCTAGCTTGGTCATGAGCCCACCTAAGGTTGGAGATGAGTCTTACAAGTCGTATAGTGCTGAGAGAGATGGAATTTTGTCATCGCTTGCAAGGCGTGCAAAGACACTGGAAGAAGCATTAAACAAATTAGAGGGTGTAACCTGCAACAAAGCTGAAGGAGCCATGTATCTATTTCCTCGTATTCACATGCCTGAAAAGGCAATCAAAGCTGCAGAAGCTGCAAATAAAGCTGCTGATGCCTTCTATTGTCAACGCCTGCTTGATGCCACAGGAGTAGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTACCTGGTACGTGGCATTTTAGGTGCACCATATTGCCCCAAGAAGAAAAGATTCCAGCCATTGTTTCTCGTTTGACTGAGTTCCATAAGAAGTTCATGGATGAGTTTCGCGACTAA 1611 0.45 MMRKFVIHRVRSLLSRSLQHQHRSPSPLLHSRLSSATSSAIDFDPSSMASSPSDSSFPVTASNINPKVLECEYAVRGEIVTLAQKLQQELQTNRGFHPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPAILDRSETQGLFSADAIERARQILNQIPGRATGAYSHSRGIKGLNDAIAAGIEARDGFPADPNDIFMTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASITLHGGTLVPYYLDEATGWGLEISELKRQLEAAKSNGISVRALVVINPGNPTGQVLSEENQRDIVQFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVTRSMGYGENDISLVSFQSVSKGYYGECGKRGGYMEITGFSADVREQIYKVASVNLCSNTSGQILASLVMSPPKVGDESYKSYSAERDGILSSLARRAKTLEEALNKLEGVTCNKAEGAMYLFPRIHMPEKAIKAAEAANKAADAFYCQRLLDATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHKKFMDEFRD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1354 536 SUPERFAMILY PLP-dependent transferases 62 530 IPR015424 -
Dere11g1354 536 CDD AAT_like 146 525 - -
Dere11g1354 536 FunFam alanine aminotransferase 1 398 536 - -
Dere11g1354 536 Gene3D - 164 410 IPR015421 GO:0003824
Dere11g1354 536 FunFam alanine aminotransferase 2 164 410 - -
Dere11g1354 536 Pfam Aminotransferase class I and II 158 515 IPR004839 GO:0009058|GO:0030170
Dere11g1354 536 PANTHER ALANINE AMINOTRANSFERASE 53 535 IPR045088 GO:0008483
Dere11g1354 536 Gene3D - 113 163 - -
Dere11g1354 536 Gene3D Aspartate Aminotransferase, domain 1 63 534 IPR015422 GO:0003824
Dere11g1354 536 FunFam Alanine aminotransferase 2 113 163 - -
Dere11g1354 536 Coils Coil 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1354 Dere-ChrDere11 25359741 25366926 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1354 11 25359741 25366926 Dere11g1354 11 25359741 25366926 ECH