Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1222 ATGATTTTATACAACCCATTTTTCCTCTTCATTCTTTTCATATTCTTGTTATATATTATCCTTGTGATTCTGTTTAAAACTGGATTGATATACACTGTGAAGAACTGTTGGAGAAGCATTGAAGATAGTTTTTATGTTTACCAGTTCTTCAAAGTCCCAGAACTGAATGAAGGCATGCAGGAGAATCCGCTTTACAAGAAGGTCTTTCTGTATTTGCATTCTCTGCCTTCCATTGAAGATTCCGATTATACCAATTTGATCACAGGGAAGAAGAACAACGACATCGTTCTCTGCCTTGACCCCAAACAAACCATCGAGGACGATTTTCTCGGAGCTAGAGTCTTCTGGCTCAACGAAGGGGACGAAAAATCCGAGTTAAACAGTGCCAGAACGTTCATCCTGAAGATCAGGAAGGCCGACAAGAGACGAATTCTTCGCCCGTATTTCCAGCACATCCACACCGTCGCTGACGAAATCGAGCAGCAAGGAAAACGTGGTTTGAGACTGTTCATGATCACAAATTCAATAGGCGGTCGAAAAGGACGGTGGAGATCCGTCCCCTTCACGCATCCCTCAACGTTCGACACCATAGCCATGGAATCCGACCTCAAGAACAAGGTGAAATCCGACCTCGAATCGTTCCTCAAGGCGAAACAGTACTACAACAGACTCGGTCGCGTGTGGAAACGGAGCTTCCTTCTGTACGGGCCGTCCGGCACCGGAAAATCGAGTTTCATCGCCGCAATGGCCAATTTCCTCTACTACGACGTGTACGACATGGACCTCTCGAGAGTCCCGAGCGATTCGGATCTGAAATCCATGCTGCTTCAAACGACGGCGAAATCGATCATCGTTGTGGAAGACCTCGATCGGTTCCTGATGGAGAAATCGACGGCGGTGAGCTTATCAGGGATTCTGAACTTCATGGACGGAATCTTGAACTCGTGCTGCGCCGAGGAGACGATCATGGTATTCACGATGAACAGCAAGGAGCACGTGGATCCGGATGTTCTCCGTCCTGGTCGGGTAGACGTACATATCCAGTTTCGCCTGTGCGATTTTCCGGCTTTCAAGACGTTAGCGAGTAGTTATTTGGGGGTGAAGGACCACAAGCTATTTCCTCAGGTGGAGGAGATGTTTCAGAACGGAGCGAGTTTGAGCGCCGCGGAAATCGGCGAGTTGATGATCGCAAATCGAAACTCGCCGAGTCGGGCGATTAAAACGGTTATCCAGGCATTGCAAACGGACGGCGATGGGAGGGGGCGCAGCGGGAAGATCGGACGGCAGTTAGGGGACCACGGGGTTATGGACGAACCGGAAGGGGTACTGTGCAGTGACGGTTTGCATACGGTTAAGGATTTGCGGAAACTGTACAGTTTTTTCAGATCAAAGAACCAAAGAAAATCTCAACCGTCCATGCTAAGGTGA 1428 0.4867 MILYNPFFLFILFIFLLYIILVILFKTGLIYTVKNCWRSIEDSFYVYQFFKVPELNEGMQENPLYKKVFLYLHSLPSIEDSDYTNLITGKKNNDIVLCLDPKQTIEDDFLGARVFWLNEGDEKSELNSARTFILKIRKADKRRILRPYFQHIHTVADEIEQQGKRGLRLFMITNSIGGRKGRWRSVPFTHPSTFDTIAMESDLKNKVKSDLESFLKAKQYYNRLGRVWKRSFLLYGPSGTGKSSFIAAMANFLYYDVYDMDLSRVPSDSDLKSMLLQTTAKSIIVVEDLDRFLMEKSTAVSLSGILNFMDGILNSCCAEETIMVFTMNSKEHVDPDVLRPGRVDVHIQFRLCDFPAFKTLASSYLGVKDHKLFPQVEEMFQNGASLSAAEIGELMIANRNSPSRAIKTVIQALQTDGDGRGRSGKIGRQLGDHGVMDEPEGVLCSDGLHTVKDLRKLYSFFRSKNQRKSQPSMLR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1222 475 SMART AAA_5 228 353 IPR003593 GO:0016887
Dere11g1222 475 Gene3D - 184 351 IPR027417 -
Dere11g1222 475 PANTHER BCS1 AAA-TYPE ATPASE 43 414 - -
Dere11g1222 475 Pfam ATPase family associated with various cellular activities (AAA) 233 350 IPR003959 GO:0005524|GO:0016887
Dere11g1222 475 Pfam Domain associated at C-terminal with AAA 33 116 IPR025753 -
Dere11g1222 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 412 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1222 Dere-ChrDere11 23363213 23364640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1222 186 347 Miscellaneous Gene Families AT5G53170 28.000 2.98e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1222 11 23363213 23364640 Dere11g1222 11 23363213 23364640 ECH