Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1171 ATGGGCGAACATGAGGGGTGGGCACAGCCACCTGGTGGTCTATTGCCAAATGGCCTGTTGCCCAATGAAGCTGCCTCGGTAATGCGAGTGCTTGACTCGGAGAGATGGTTAAAGGCTGAGGAAAGGACTGCAGAGCTAATTACCTGCATTCAGCCTAACCGACCCTCTGAAGAGCGCCGAAATGCAGTTGCAGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCCTGCCAGGTGTTCACCTTTGGGTCTGTCCCGCTCAAAACTTATTTGCCTGATGGAGATATTGACTTGACGGCATTCAGTAAAAATCAAAACTTGAAGGATACATGGGCACATCAAGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGGGCAAGCAGAGTTCCATGTGAAAGAGGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGAAAATATTGTGGTTGACATATCATTTAACCAGCTTGGAGGGTTGTGTACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAAGCAAAATCATTTATTCAAGCGTAGCATTATACTTATTAAAGCTTGGTGTTATTATGAGAGCCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTACGCATTAGAAACTTTGGTTCTATACATATTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTATTGTATCGTTTTCTGGAGTTTTTTAGTAAGTTTGACTGGGACAATTTCTGTGTAAGCCTTTGGGGTCCAGTACCAATTAGTTCTCTCCCAGATGTTACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTATTGCTTAGCAAGTTATTTCTTGATGCCTGTAGTTCAGTTTATGCTGTTGTCCCTGGCGGTCAAGAAAATCATGGGCAAACCTTCATTTCCAAGCATTTTAATGTTATTGATCCTTTGCGTGTTAACAATAACCTTGGGCGAAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCTTTTGCATTTGGGGCTAAAAAGCTGGCTAGACTACATCATTGCCCAAAGGAAGACTTATTTTCTGAAGTCAATCAGTTCTTTATGAACACTTGGGACAGACATGGAAATGGGCAGCGGCCTGATGCTCCAAGCAATGACTTATGGTGTTTGAGGTTATCCAGTCATGACCGTTTAAAAGGATACGAGAATCTCAGGAGCAATAGCCAAAAAAATGATAATACCTCTGATCAGGAATACCAAGTAGAAGGGACACATGGTACACGAAGTGGTCCATCTCATCACAGTAGTTCTTCTAAGAGTAGTGATGTTTCTACAGTACCACATACACAAAGTCTAAAGGGCCATAGCAATCAAAATAATTTAAGGACCTCTGACCTGGTCAGAAGGGAAATCAGTTCTAATCATGGTGCTCATGTTGATAAAGGTCAGAGAACTGTTAAACCCAATAACCCAATGATTGATGTTCAGGGAAGGTTTCTATTTGCAAGAACACATTCCAGTCCTGAGCTGACTGACCCATATGGTGATGTTCCTTCCCAAGGAAGGCGTACAAGAGCCCAGGAAAGTGGTAAAGGGCAGAATTCCTTGGCAAAGTTGGAGTATAGTCGTAGGAGGAATCTTGAATCTGACATGGCAGCAAGCCATGGTGTTAGAATTGATAATTCGTCTGCTGGGCTCATATCACCCAGTCATGTCCTTGATGCTGCTGCTGATTTAAATAGTGGATCAAATAATTACCATGAGGAATCAGGCTCTGGTGTAATGGGTGAAGAGTTTGCATCTGCTGCTAGAATGGGAGCATCACAGATGATGCTTCAGGAGGAGCAAGATCTCTTGAACATGATGGCATCTTCAACTACTCATGGTTTCAGTGATCAGGCTCATGTTCCAGTGAGTTTAGCTACAGGTCATCTTCCATTTCCATTTCCACCTTACATTCTTGCATCAATGGGATATGCACAGAGAAATATGGGTAATATTCCCTTGATTGAGGCTACTTGGGGTACAAATATGCAATTTCCTCAAGGTTCAGTCCCTTCTTCATTGACTCCATATTTCCCTGGCATAGGATTGACTTCGAATCCTGAAGATGCAATTGAAACCAGTAATGATAGTTTTAGTGCTGTTGAAATGAATCCAAGGGAAGTTGATAATGATTTCTGGCATGACCAAGAAAGGGGTTCTGCTAGTGGGGTTGAAGTTGATAATGGAATTCCCGATGATAAGCAACAGTCAACTTCTGGTGTTTATACCTTTGTCCCGTTATCTCAGGTAAGCAGCTCTGGTAATTCTGCCAGAATTCAGCAGAAGTATAAAGAAAACAGAGGATTAACAAGGGAAGAACATATTGATACTTTTCAATATGAAGATAGCAGGGGAAATGAGGTTTGTTTTGATGACAGAATAGCAAATTCTAAATTAACCAATGCTCCTTTAAGTTCCAAGAGTAAAACCTCCTCTGAAAGCTCCTGGGAAGGATCACCGACGAAGTTATCAAAATCAACCAAGGAAAAAAGAGGTAGCAAGAATATTCCCTCAGTGGTATCCTCTGGTTATGGGAAGGGTAAGGATATCTCAGAAATGTCATCTAATCTAACAGATGATGAGAACGAAGAATGGACTTCTCTTTCAACAACTAATATGCCAGAAAGAAGCACCGGAGCCCCAGCTGTTGCTTCCATGCATGTTTCAAGGCATCAAATACCTGGATTTGAACCAGTTCAGACAAGTGGATCGGATTCGCTGATACCTGTATCTCCAGTGCTTTTAGGTCCAGGTTCTCACCAAAGAGGAGTTGATAATTCTGGGGTTGTTCCATTTGCATTCTATCCTACGGGGCCACCTATACCCTTTTTAACAATGCTTCCTGTATATAATTTTCCAACTGATTCAGGAACTTCTAACACATTAACAAGCAATTTCAATGGGGAAGAAGCAGTGGATAACAGTGATTCTGGTCAGACTTTTGATTCATCTGAAGGATATGACCAGCTTGAGGCATCAAGCCCTCCTAATTTTGTGAGAAGGGCTGCTCTTGAGTCATCTGAGTGCAAGTCTGACATTCTTAATAGTGACTTTGTGAGCCATTGGCAAAATTTGCAATATGGGCGGCTTTGTCAAAACTCATGTCATCCGCCTTCAGTTATCTATCCTTCAACTGTGCCTCCTGTTTATTTGCAGGGTCGTTTTCCTTGGGATGGTCCTGGAAGACCTCTTTCAACTAACACAAATCTTTTTACTCAGCTTATGAACTATGGGCCACATTTAGTTCCTGTTGCCCCTCTGCAGTCGGTTTTGAACAGACCTGCCTATATTTACCAGCGTTTTGTGGATGAGATGCCACGTTATCGAAGTGGGACTGGAACCTACCTGCCAAATCCTAAAGTTTCTGCTTGTGATCGACATTCTACAAGTACCAGAAGAGGAAATTACAACTATGATAGAAGTAACCACCATGGTGATAGGGAAGGAAATTGGAATATGAACTCAAAGATGCGAGCAACTAGACGTGGCAATAATCGATTCCAAAGTGAGAGGCCAAGCTCAAAGCTGGAGCGGCTGGCAACAAGTGAGAGCCGAGCTGAAAGGCCAAGGGGGTCGAATAGACATGACTCTTTCGTGTCATACCAGACTCAGAATGGACCAGTTCGCTCAAATTCCTCACAGAACAGTTCTGCCAATGTGGCATATAGTATGTACTCTCTGCCAGGCATGAATCCCAGTGTGGTCTCATCAAATGGATCCACTATTCCATCTGTTGTAATGTTGTATCCTTATGATCATAATGCTGGCTACAGTTCAGCAGAACATTTGGAGTTTGGGTCTTTTGGACCAATTGGTTTTCCAGGTGTCAACGAACTATCACTGAACGAGGGAAGCCATTCTGGTGGAACATTTGAGTTACTAAGGCTTTACGGAGGCTCTACTCAACAATCCTCACCAGATCAACCCTCTTCACCCCACCTCCCAAGGTAG 3990 0.4281 MGEHEGWAQPPGGLLPNGLLPNEAASVMRVLDSERWLKAEERTAELITCIQPNRPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLENEEKNGQAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLIKQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVVPGGQENHGQTFISKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKKLARLHHCPKEDLFSEVNQFFMNTWDRHGNGQRPDAPSNDLWCLRLSSHDRLKGYENLRSNSQKNDNTSDQEYQVEGTHGTRSGPSHHSSSSKSSDVSTVPHTQSLKGHSNQNNLRTSDLVRREISSNHGAHVDKGQRTVKPNNPMIDVQGRFLFARTHSSPELTDPYGDVPSQGRRTRAQESGKGQNSLAKLEYSRRRNLESDMAASHGVRIDNSSAGLISPSHVLDAAADLNSGSNNYHEESGSGVMGEEFASAARMGASQMMLQEEQDLLNMMASSTTHGFSDQAHVPVSLATGHLPFPFPPYILASMGYAQRNMGNIPLIEATWGTNMQFPQGSVPSSLTPYFPGIGLTSNPEDAIETSNDSFSAVEMNPREVDNDFWHDQERGSASGVEVDNGIPDDKQQSTSGVYTFVPLSQVSSSGNSARIQQKYKENRGLTREEHIDTFQYEDSRGNEVCFDDRIANSKLTNAPLSSKSKTSSESSWEGSPTKLSKSTKEKRGSKNIPSVVSSGYGKGKDISEMSSNLTDDENEEWTSLSTTNMPERSTGAPAVASMHVSRHQIPGFEPVQTSGSDSLIPVSPVLLGPGSHQRGVDNSGVVPFAFYPTGPPIPFLTMLPVYNFPTDSGTSNTLTSNFNGEEAVDNSDSGQTFDSSEGYDQLEASSPPNFVRRAALESSECKSDILNSDFVSHWQNLQYGRLCQNSCHPPSVIYPSTVPPVYLQGRFPWDGPGRPLSTNTNLFTQLMNYGPHLVPVAPLQSVLNRPAYIYQRFVDEMPRYRSGTGTYLPNPKVSACDRHSTSTRRGNYNYDRSNHHGDREGNWNMNSKMRATRRGNNRFQSERPSSKLERLATSESRAERPRGSNRHDSFVSYQTQNGPVRSNSSQNSSANVAYSMYSLPGMNPSVVSSNGSTIPSVVMLYPYDHNAGYSSAEHLEFGSFGPIGFPGVNELSLNEGSHSGGTFELLRLYGGSTQQSSPDQPSSPHLPR 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1171 1329 MobiDBLite consensus disorder prediction 981 1004 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 733 752 - -
Dere11g1171 1329 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 873 891 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 814 900 - -
Dere11g1171 1329 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 981 1007 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 814 835 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 520 537 - -
Dere11g1171 1329 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1184 1207 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1124 1228 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 402 461 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 503 537 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1310 1329 - -
Dere11g1171 1329 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1166 1183 - -
Dere11g1171 1329 CDD NT_PAP_TUTase 59 166 - -
Dere11g1171 1329 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Dere11g1171 1329 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1328 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1208 1228 - -
Dere11g1171 1329 MobiDBLite consensus disorder prediction 1150 1164 - -
Dere11g1171 1329 Gene3D - 162 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1171 Dere-ChrDere11 22511166 22517866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1171 11 22511166 22517866 Dere11g1171 11 22511166 22517866 ECH