Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0888 ATGTCATTGTCGGATTCCGAGACCCCCCTTGGCGGATCATCAGAATACAAGCCTTTCCGGCAAATCAGCCATGACCGGTTATTGTATGAAATGCTTGGAGCTGCAAAGACGGGAGATTCTAAATCATGGAAGGTGCTCATAATGGATAAAGTCACGGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATCACAGACCAAGAAGTTTCCTTGGTGGAAGACCTTTTCAGGAGAAGGCAACCATTACCATCTATGGATGCTGTTTATTTCATGCAGCCATTAAAAGAGAATGTTATTATGTTCTTGTCTGACATGTCTGGAAGGGAGCCCTTATACAGGAAAGCATTCGTATTTTTTAGCTCACCAGTCCCAAAGGAATTTATAAACCACATTAAGTGCGATACAAGTGTCTTACCCCGCATAGCTGCACTTAGAGAGATGAATTTGGAATACTTTCCAGTAGATAGCCAGGCGTTTGTAACTGAGCAAGAAAGAGCAATGGAGGAACTTTATGGCAATATTGATAATACTCGAAGATTTAACACCTGCTTGAATGTTATGGCAACTCGAATAGCTACAGTGTTTGCTTCATTAAAGGAGTTACCACATGTGTGGTTTCGTGCTGCCAAGGAAGGTGACGAATCAACACCTCGTGATTTCATTCCATCCAAGCTTGCTGATGCAGTTTGGGACATAGTCTCTAAATATAAATCTACCATCCCAAACTTTCCACAGAGTGAAACATGTGAACTGCTCATTGTGGATAGATCTGTTGATCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGGATATGGAGGGAAATAAATATATATATGAGGTTCCCAGCAAAACAGGGGGTGAACCTGAAAGAAAGGAGGCTCTTTTGGAAGAACACGATTCGGTCTGGCTTGAGCTTCGCCATGCACATATAGCAGATGCTAGTGAAAGACTGTCTGACAAGATGACCAACTTTGTATCAAAGAACAAAGCTGCGCAAATCCATCAAAGTGGAAGAGATGGCAGTGAATTGTCCACACGAGATTTGCAGAAAATGGTTCAAGCTTTGCCCCAGTACACTGAGCAAATGGAAAAGATTTCTCTCCATGTAGAGCTAGCTGGAAAAATCAACAAAATTATTAGAGATACAGGACTTCGAGAGCTTGGACAATTGGAGCAGGATCTTGTTTTTGGTGATGCGGGAGCCAAGGAAGTTATTAACTTTCTAAGAACAAAGCAGGATTCAACAGTTGAATACAAGTTGCGTTTATTAATGATTTATGCAATTGTCTATCCTGAGAAGTTTGAGGGAGATAAAGCTACAAAGCTAATGCAGTTGGCGAAACTATCACCTGATGACATGAAGGTTATCAGTAACATGCAATTGCTGGCAGGATCATCAAGCAAGAAGTCATCTACTGGCAATTTCTCACTCAAGTTCACGAATCATAAGACAAAGCAAGCAGCAAGAAAAGATCGTACTGACGAGGAGGAAACATGGCAACTATTTCGATTTTACCCCATGATAGAGGAGCTTATTGAAAATCTCAGCAAGGGTGAGTTGCCAAAGAGTGACTATTCATGTAAAAATGAATCAAGTCCTCCCGCTCAAGGGGGCTCTAAAGGTGGGCAGCGCCCACAGACTACTGCATCTAATAATCCACATTCAATGAGGTCAAGACGGACAGCAAACTGGGGACGATCTCGTCAATCTGATGATGGATATTCAAGTGACTCCATGTTGAAGAATGTGAGTAATGATTTCAAGAAGATGGGGAAGCGCATCTTTGTGTTTATCATTGGTGGGGCTACTCGATCTGAGCTTCGAGTTTGCCACAAATTGACATCAAAACTAAGGAGAGAGGTCATTCTCGGTTCTTCTTCCATCGATGATCCTCCCCAATACATCACGGTAATAATTCCATACCATTATACAAATTCTTTCGTTTGGGGTAGTAGCTAA 1989 0.4168 MSLSDSETPLGGSSEYKPFRQISHDRLLYEMLGAAKTGDSKSWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPSMDAVYFMQPLKENVIMFLSDMSGREPLYRKAFVFFSSPVPKEFINHIKCDTSVLPRIAALREMNLEYFPVDSQAFVTEQERAMEELYGNIDNTRRFNTCLNVMATRIATVFASLKELPHVWFRAAKEGDESTPRDFIPSKLADAVWDIVSKYKSTIPNFPQSETCELLIVDRSVDQIAPVIHEWTYDAMCHDLLDMEGNKYIYEVPSKTGGEPERKEALLEEHDSVWLELRHAHIADASERLSDKMTNFVSKNKAAQIHQSGRDGSELSTRDLQKMVQALPQYTEQMEKISLHVELAGKINKIIRDTGLRELGQLEQDLVFGDAGAKEVINFLRTKQDSTVEYKLRLLMIYAIVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLAGSSSKKSSTGNFSLKFTNHKTKQAARKDRTDEEETWQLFRFYPMIEELIENLSKGELPKSDYSCKNESSPPAQGGSKGGQRPQTTASNNPHSMRSRRTANWGRSRQSDDGYSSDSMLKNVSNDFKKMGKRIFVFIIGGATRSELRVCHKLTSKLRREVILGSSSIDDPPQYITVIIPYHYTNSFVWGSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0888 662 Gene3D - 393 514 - -
Dere11g0888 662 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 273 389 IPR043127 -
Dere11g0888 662 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 31 646 IPR001619 GO:0016192
Dere11g0888 662 Pfam Sec1 family 44 645 IPR001619 GO:0016192
Dere11g0888 662 SUPERFAMILY Sec1/munc18-like (SM) proteins 19 648 IPR036045 -
Dere11g0888 662 Gene3D - 13 147 IPR043154 -
Dere11g0888 662 Gene3D - 516 649 IPR027482 -
Dere11g0888 662 PIRSF VPS45_Sec1 14 654 IPR001619 GO:0016192
Dere11g0888 662 MobiDBLite consensus disorder prediction 535 588 - -
Dere11g0888 662 MobiDBLite consensus disorder prediction 532 588 - -
Dere11g0888 662 Gene3D - 152 272 IPR027482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0888 Dere-ChrDere11 16823891 16854073 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0888 11 16823891 16854073 Dere11g0888 11 16823891 16854073 ECH