Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0803 ATGTTGAGAAGTCTTCACTCAGACTCCACTCGCAGAATCACCATCTTAGTCTTCAAATTCTCTTCCCTGCTATACTTCTTTTCTTCAAAACTCACCACTCATGCCTACCAAACCAGCCCTCTCGTCTTCATCTACGCAGGCTGCTCTCAAGAGAAATACCAACCCAACTCGCCATTCGAAGCCAATTTGAACTCCTTTCTGGCTTCAATTTTCAGTTCGTCCTCTCAGTTTTCCTACAACAGCTTTTCTCTCGGAAATGGAAACTCAACATCATCACCATCAGAAGCCGCCAATAATATCTACGGCTTATACCAATGCAGGGGCGATTTGCAGCCCATAGACTGCAGAAAATGTGTTGAAACTTCTGTTCGCCAAATAGGGCTTGTTTGTCCCTATTCCTTTGGAGCCTCTTTGCAGCTAGAAGGCTGCTATCTCAGATACGAGCATGTGGACTTTCTGGGCAAGGCTGACACAAGCCTTAGGTATAAAAGGTGTAGGAGACTGGTGAGGAACGACGGCGAGTTTTTCCGGCGAAGAGACGGTGTTCTGGTGGATCTGATGGCGGCTAGCGGGTTTAGGGTTAGCAAGTCGGGGTTTGTTGAGGGCATAGCACAGTGCTTGGGGGAGTTGAGTGCAGCAGATTGCTCCTCTTGCGTTGTGCAAGCAGTGGGCAAGATGAAGAGCTTGTGTGGATCTGCAGCAGCAGCTGATGTGTTCTTAACACAGTGTTATGCTCGTTACTGGGCTTCTGGCTACTATGAGGAAGCTCTAGATTCGTCCAAGAAGGATCAAGTGGGGAAAGCAACAGCCATTTTAGTGGGGTTGCTAGCAGGTCTTGCCATTCTCGTTGTGATTCTCTCAATTTGCCAAAGAGCAATGGGTCAAAAATAG 891 0.477 MLRSLHSDSTRRITILVFKFSSLLYFFSSKLTTHAYQTSPLVFIYAGCSQEKYQPNSPFEANLNSFLASIFSSSSQFSYNSFSLGNGNSTSSPSEAANNIYGLYQCRGDLQPIDCRKCVETSVRQIGLVCPYSFGASLQLEGCYLRYEHVDFLGKADTSLRYKRCRRLVRNDGEFFRRRDGVLVDLMAASGFRVSKSGFVEGIAQCLGELSAADCSSCVVQAVGKMKSLCGSAAAADVFLTQCYARYWASGYYEEALDSSKKDQVGKATAILVGLLAGLAILVVILSICQRAMGQK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0803 296 Gene3D - 180 250 IPR038408 -
Dere11g0803 296 Gene3D - 41 152 IPR038408 -
Dere11g0803 296 FunFam Cysteine-rich repeat secretory protein 15 157 250 - -
Dere11g0803 296 Pfam Salt stress response/antifungal 197 247 IPR002902 -
Dere11g0803 296 Pfam Salt stress response/antifungal 48 149 IPR002902 -
Dere11g0803 296 ProSiteProfiles Gnk2-homologous domain profile. 154 252 IPR002902 -
Dere11g0803 296 FunFam cysteine-rich repeat secretory protein 3 41 152 - -
Dere11g0803 296 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 22 293 - -
Dere11g0803 296 ProSiteProfiles Gnk2-homologous domain profile. 41 152 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0803 Dere-ChrDere11 14950343 14953421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0803 46 286 Receptor kinase-like Gene Family AT5G40380 27.869 4.57e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0803 11 14950343 14953421 Dere11g0803 11 14950343 14953421 ECH