Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0742 ATGGCTTCAAGACCTGGAATCCTCACTGACTGGCCATGGAAGCCTCTCGGAAGCTTTAAGTATGGGGTACTGGCTCCCTGGGTGATTTACAGCACGTATTCTTTCTGTGTGAAGGACAAGAGTGAAAGGGACGTAACCCCGCTTCTCGTACCTCCATTTTTACTATGGCGTATGCTTCACAACCAGCTATGGATCACTCTCTCTCGTTATCGAACAGCAAAAGGCAACGCTAGGATTGTTGACAAGGGCATTGAATTCGATCAAGTTGATAGAGAAAGAGGATGGGATGACCAAATATTGTTCAATGGAATATTATACTACTTTGCGATGTATACTTTGGCTGGGGCTTCTCACCTACCATTATGGAGAACAGATGGAGTGGTTATGACAATATTGCTGCATGCGGGGCCTGTGGAGTTTCTGTACTATTGGCTTCACAGAGCACTGCACCACCATTACCTCTATTCTCGCTATCATTCTCATCATCATTCCTCCATTGTCACTGAGCCTATAACTTCCGTGATCCATCCATTTGCAGAGCACATATCATATTTCCTTCTGTTCGCAATACCACAGTTAACATTGATGTTCACGGGAACAGCGTCTATAGCGGCCGTAATGGGATATATCACTTACATTGATTTCATGAACAACATGGGTCACTGCAACTTCGAGCTCATCCCTACCTGGCTCTTCCAAATACTTCCCTTCCTTAAATATCTCATGTACACTCCCTCGTTTCACTCTTTGCACCACACGCAATTCAGGACAAACTACTCTCTATTCATGCCATTATATGATTACATGTATGAGACCATGGACAAATCTTCAGATCAATTGTATGAGTCTGCGCTTAGAAGGGAGGAAGAGTCCCCAGATGTTGTGCATCTAACACATCTCACAACACCTGAATCCATCTACCATCTTCGGCTTGGGTTTGCTTACTTGGCTTCAAAGCCTCACACATCGAAGTGGTACCTCTGGCTAATGTGGCCTTTAACGTTGTGGTCCATAATCTTCACTTGGGTCTATGGTCGTACCTTCGTTTTGGAGAGGAATCGTTTCAATAAGCTAAAGCTTCAAATGTGGGCCCTACCCAAGTACACCATTCAATACTTTCTACAATGGCAAAAGGAGGCTATCAACAAAGCAATTGAGGAAGCAATAATGGAAGCTGAAAGAAAAGGCATAAAAGTGGTAAGCCTGGGCCTTCTGAATCAAGAAGAGGAGCTTAACAGCTATGGAGGGCTTTACATTAAGAAGCATCCAAAGCTAAATGTGAAAGTGGTAGATGGTAGCAGTCTGGCTGTGGCCATTGTTGTTAACAGTATACCAAAAGGAACCACTCAAGTGTTACTTAGAGGCAAACTTAACAAAGTTGCTTCTGCCATTGCCTTCAACTTGTGCCAAAAGGGTATTCAGGTCGCTACAGTGCATGAGGATGATTATGATAAGCTCAAAAGGGCATTTAATATCGAATTTGGAAGTAATTTGATCATTTCCAGAAGCTATTCTCAAACGACATGGTTGGTGGGAGATGGATTGAGTGAAGAGGAACAATTAAAAGCACCCAAAGGCACTCTGTTTATTCCATACTCTCAATTCCCACCAAAGAAATATCGCAAGGATTGCTTCTACCATGGCACTCCCGCGATGCTATCTCCCACATCTCTTGAGAATGTGCATTCTTGTGAGAATTGGCTACCAAGAAGAGTAATGAGTGCTTCTCGAATAGCTGGAATAGTGCATGCTTTAGAAGGATGGAATGAACATGAGTGTGGAAACACAATGCTAGACACTGCCCAAGTTTGGGAGACTACTCTTCAACATGGGTTTCAACCTGTTGAGCCAAAGTACACAGCATGA 1866 0.4346 MASRPGILTDWPWKPLGSFKYGVLAPWVIYSTYSFCVKDKSERDVTPLLVPPFLLWRMLHNQLWITLSRYRTAKGNARIVDKGIEFDQVDRERGWDDQILFNGILYYFAMYTLAGASHLPLWRTDGVVMTILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPQLTLMFTGTASIAAVMGYITYIDFMNNMGHCNFELIPTWLFQILPFLKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYMYETMDKSSDQLYESALRREEESPDVVHLTHLTTPESIYHLRLGFAYLASKPHTSKWYLWLMWPLTLWSIIFTWVYGRTFVLERNRFNKLKLQMWALPKYTIQYFLQWQKEAINKAIEEAIMEAERKGIKVVSLGLLNQEEELNSYGGLYIKKHPKLNVKVVDGSSLAVAIVVNSIPKGTTQVLLRGKLNKVASAIAFNLCQKGIQVATVHEDDYDKLKRAFNIEFGSNLIISRSYSQTTWLVGDGLSEEEQLKAPKGTLFIPYSQFPPKKYRKDCFYHGTPAMLSPTSLENVHSCENWLPRRVMSASRIAGIVHALEGWNEHECGNTMLDTAQVWETTLQHGFQPVEPKYTA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0742 621 PANTHER STEROL DESATURASE 14 614 - -
Dere11g0742 621 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Dere11g0742 621 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0742 Dere-ChrDere11 13226849 13236862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0742 1 617 Lipid Metabolism Gene Families AT1G02190 59.330 0.0 747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0742 11 13226849 13236862 Dere11g0742 11 13226849 13236862 ECH