Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0252 ATGAATGGTGAATTCTTAAGCATCACCTCACTACTACTACTTCTTCTTCTTCAACTGTGGAAAGAGACATTTCGACCCAGATCCACCCGGAGATTTGGACACTGTCTTTCGCGTATTTCAGAGACAATGTTGCCTCAGAAGCAGGCAGAGGAAGCCATCGTCACCAACTTCACCGAGACAGAGCATGAAGGAGGCGTCGTGGCGGAAGAAGAGAAGGAGCAAGACAACTCCATTTTCACCCTCAAGAGCTTTCTCTGGCATGGCGGTTCTGTTTGGGATGCTTGGTTCAGCTGTGCTTCAAACCAAGTAGCTCAAGTGCTCTTGACGCTTCCCTATTCCTTCTCTCAACTGGGTATGCTTTCAGGCATACTGCTTCAGGTATTCTACGGGCTAATTGGAAGCTGGACGGCTTATCTAATCAGTGTCCTCTATGTGGAATACCGAACCAGAAAGGAAAAGGAAAACGTTAGCTTCAAGAACCATGTGATTCAGTGGTTCGAAGTGCTTGATGGATTACTGGGTCCGTATTGGAAAGCTGTGGGGCTAGCCTTCAACTGTACCTTCCTCCTCTTCGGATCTGTGATTCAGCTTATAGCCTGTGCAAGTAACATCTACTACATAAATGACAAATTGGACAAACGAACTTGGACTTACATTTTTGGAGCTTGCTGTGCCACCACTGTGTTCATACCTTCTTTCCACAACTACCGAATCTGGTCGTTTCTGGGTCTTGGAATGACCACTTACACTGCTTGGTATTTAGCTATAGCGGCGCTTATTCATGGCCAGGCTGAGAATGTGACACACTCAGGTCCAGCGAAGCTGGTGCTATACTTCACCGGAGCCACTAATATTCTGTACACGTTTGGTGGACATGCTGTTACTGTGGAGATTATGCACGCCATGTGGAAGCCTCAGAAGTTCAAGTACATCTATTTGCTCGCCACTCTGTACGTCTTCACGCTAACGCTTCCGTCAGCCTCCGCCGTTTACTGGGCCTTCGGCGACGAGCTTCTCAACCACTCCAACGCCTTCTCCCTCCTTCCCAAAACTAGATTCCGTGATGCCGCCGTTATCCTCATGCTTATCCATCAGTTTATCACATTTGGGTTTGCGTGTACACCATTGTACTTTGTGTGGGAGAAGGTGATTGGAATGCATGACACCAGAAGCATCTGCTTGAGGGCACTGGCCAGATTGCCGGTAGTGATTCCAATATGGTTCTTAGCCATCATCTTCCCATTCTTTGGACCCATCAACTCTGCGGTTGGAGCTCTTCTTGTTAGCTTCACTGTCTACATCATCCCTGCTTTGGCTCATATGCTTACTTACCGAAAAGCCTCTGCTAGACAGAATGCTGCAGAGAAGCCTCCCTTCTTCCTGCCAAGCTGGACAGCTGTGTATGTCTTCAATGCTTTCATTGTGGTATGGGTTTTTGTGGTTGGATTTGGGTTTGGAGGATGGGCCAGCATGACCAACTTTGTGAAGCAAATTGACACATTTGGGCTCTTCGCCAAGTGCTACCAGTGCAAGCCACCGACGCCACCACCGGCCGTGGCGGCACCGCCTCCTCACGCTCATCGCCACTGA 1590 0.4874 MNGEFLSITSLLLLLLLQLWKETFRPRSTRRFGHCLSRISETMLPQKQAEEAIVTNFTETEHEGGVVAEEEKEQDNSIFTLKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGLIGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQAENVTHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSASAVYWAFGDELLNHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFLPSWTAVYVFNAFIVVWVFVVGFGFGGWASMTNFVKQIDTFGLFAKCYQCKPPTPPPAVAAPPPHAHRH 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0252 529 PANTHER OS05G0424000 PROTEIN-RELATED 79 473 - -
Dere11g0252 529 Pfam Transmembrane amino acid transporter protein 87 480 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0252 Dere-ChrDere11 4444490 4450221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0252 46 529 Organic Solute Cotransporters AT2G21050 77.732 0.0 778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1450 04 16062171 16067046 Dere11g0252 11 4444490 4450221 CCT