Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2254 ATGTCGGACGCTCTCTCAGTGATTCCTGCTGCCGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCGCTTGAGGTTGAGGGGATAGTGAAGCAGCTTGCTGCCGCTGGAGATCATGAAAAAATAGCGTCTGTGATCAAGTTGTTGATTGCGGACTTCACTTATTCGCCGCAAGCAAATCACCGTAAGGGAGGATTGATAGGATTAGCTGCTGCGACTGTTGGGTTGTCTACTGAAGCGGCTCAGCATCTTGAGCAAATAGTGCCCCCTGTGTTAAATTCTTTCTCTGATCAAGACAGTAGAGTTCGTTATTATGCTTGTGAAGCACTGTATAATATTGCTAAGGTTGTAAGAGGGGATTTTATTATATTCTTCAATCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCGAATGTACAAAGTGCTGCTCATCTCCTAGATCGGCTTGTGAAGGATATTGTGACGGAAAGTGACCAATTCAGTATTGAAGAGTTTATACCATTGTTGAGGGAGCGCATGAATGTCCTGAATCCATATGTTCGCCAGTTTTTGGTGGGATGGATTACAGTATTGGACAGTGTCCCAGATATTGATATGCTCGGTTTTCTACCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCAAGTCACGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGTATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATTACATGGATAAATGAGTTTGTTAAACTTGGTGGAGATCAACTTGTTCCGTACTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCGGCTGAAGGATTTGATGTAGGAGCAATCCTCTCCATTGCTAGGAGACAACTATCTAGTGAATGGGAGGCTACTCGGATTGAAGCGTTGCACTGGATATCAACCCTTTTAAACAGACACCGTGCTGAGGTTTTAACATTTTTGAATGACATATTTGACACCCTACTGAAAGCACTTTCTGACCCTTCTGATGAGGTTGTGCTTCTGGTTCTTGAAGTTCATGCTTGCATTGCTAAAGATCCTCAGCACTTCCGACAGCTTGTTGTTTTCCTAGTCCACAATTTCCGCGTGGATAATTCTCTTCTGGAGAAGCGTGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTAGATGCCGAAAGAGTCTACCGCGAACTATCAATGATTCTTGAAGGAGACTCTGATCTGGATTTTGCTTCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGCTTCGAGCTCTTTTGAAGCAATCATTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTATATGCCTCATGGTGCCATTCTCCTATGGCAATAATAAGTCTTTGCTTCTTAGCTCAGACCTACCAACATGCAAGTGCTGTTATTCAGTCTCTAGTTGAGGAGGATATTAACGTCCAATTTTTGGTCCAATTGGATAAGTTGATTCGCTTGTTGGAAACTCCAATCTTTGCTTATCTAAGATTGCAGTTTCTTGAACCTGGAAGATATATATGGTTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCATTTAAGATTCTAAAAATGCGTTTAAAAGCGGTGCCGTCGTTTTCTTTTAATGGTGAGCAATTGAAGAGAGCATCCTCAGGGAATCCCTTCCACATTCTTCATCACATAGCAAGTGGGTCTCAGATCACAGAGGACGGTGACATAGCTTTCGATGGTGGAAACCTAGATAATGGAATCAACTTTGCTGCAAGGCTACAACAGTTTGAGCAAATGCAGAACCAACATCGCATGCATGCTAAAGCCCAGGCACAGTTGCGCAACTCTTCCACTTCTGTGTCAAAGGAGGCATGA 2082 0.4232 MSDALSVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLAAAGDHEKIASVIKLLIADFTYSPQANHRKGGLIGLAAATVGLSTEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPAEGFDVGAILSIARRQLSSEWEATRIEALHWISTLLNRHRAEVLTFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAKDPQHFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSMILEGDSDLDFASIMVQALNLILLTSSELSELRALLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDINVQFLVQLDKLIRLLETPIFAYLRLQFLEPGRYIWLFKALYGLLMLLPQQSAAFKILKMRLKAVPSFSFNGEQLKRASSGNPFHILHHIASGSQITEDGDIAFDGGNLDNGINFAARLQQFEQMQNQHRMHAKAQAQLRNSSTSVSKEA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2254 693 FunFam protein VAC14 homolog 126 248 - -
Dere09g2254 693 PANTHER TAX1 BINDING PROTEIN-RELATED 7 686 IPR026825 GO:0006661|GO:0070772
Dere09g2254 693 Gene3D - 255 479 IPR011989 -
Dere09g2254 693 Gene3D - 1 251 IPR011989 -
Dere09g2254 693 FunFam protein VAC14 homolog isoform X1 249 410 - -
Dere09g2254 693 FunFam ARM repeat superfamily protein 6 125 - -
Dere09g2254 693 SUPERFAMILY ARM repeat 5 542 IPR016024 -
Dere09g2254 693 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Dere09g2254 693 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Dere09g2254 693 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2254 Dere-ChrDere09 33043742 33056084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2254 09 33043742 33056084 Dere09g2254 09 33043742 33056084 ECH