Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2250 ATGGCGACCATGACGAGCTTGATCGGGCTTATCAATAAGATTCAACGGGCTTGCACTGTCTTAGGTGACCATGGTGGGGAGGGATTGTCCCTCTGGGAGGCTCTTCCCTCGGTGGCTGTGGTCGGTGGCCAGAGTTCTGGGAAATCGTCAGTCTTGGAAAGTGTGGTGGGAAGAGATTTTCTGCCCCGTGGATCTGGTATTGTCACACGAAGGCCACTAGTGCTGCAACTTCATAAAACAGACCCTGGGCAACAGGAATATGCTGAGTTTCTTCACGCCCCAAGAAAGAGATTTACTGACTTTGCTGCTGTGAGAAAAGAAATTGCAGATGAAACAGATCGTATTACTGGAAAGACAAAGCAAATTTCTAACATTCCAATTCACCTCAGCATATATTCTCCAAATGTTGTAAACTTAACACTCATAGATCTTCCTGGGTTGACCAAGGTTGCAGTAGAGGGACAACCAGAAAGTATTGTTGAAGATATTGAAAACATGGTTCGATCGTATGTTGAGAAGCCAAATAGCATTATACTAGCTATCTCTCCTGCAAATCAAGATATTGCCACATCAGATGCTATAAAACTTGCAAGAGAAGTTGATCCATCAGGTGAAAGAACATTTGGAGTGTTGACAAAACTTGATCTTATGGATAAAGGAACCAATGCCGTCGATGTTCTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTAGGAATTGTGAACCGCTCACAAGCTGATATTAATAGAAATGTTGACATGATTGTTGCTCGTAAGAAGGAGCGTGAATATTTTGAGACAAGCCCTGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTGTCCCAGCATTTGGAGCAAGTTATCAGACAGAAAATACCTAGCATCATTGCCTTAATAAATAAAACTATTGATGAGCTTAATGCAGAGTTGGATCGTATTGGAAGACCTATTGCTGTAGACTCAGGGGCCCAACTGTACACCATTTTAGAGATGTGTCGTGCCTTTGATAAAGTTTTTAAGGAGCACCTGGATGGAGGGCGTCCTGGTGGTGACCGAATATATGGAGTTTTTGACAACCAATTACCAGCTGCTTTAAAAAAGCTCCCACTTGATCGTCATCTTTCCCTAAAAAATGTCCAGAGAGTTGTTACAGAAGCTGATGGGTATCAGCCCCATCTGATTGCTCCAGAGCAAGGTTACAGAAGACTTATTGATGGGTCTATCAACTATTTCAAAGGCCCAGCCGAAGCCACTGTGGATGCTGTTCATTTTGTTTTAAAGGAACTTGTACGGAAGTCAATTGCGGAAACTGAGGAATTGAGAAGATTTCCAACACTTCAATCTGATATAGCAGCTGCTGCAAATGAAGCATTGGAAAGATTTCGAGAAGAAAGTAGGAAGACAGTTGTACGGCTGGTTGATATGGAGTCTAGCTATCTTACAGTGGAATTTTTCAGGAAGATTAATCTTGAACCAGAAAAAAATCCTAATCGGAATGGACAGGACAGTTACACGGATAATCACCTCAGGAAGATTGGATCAAATGTTAGTTCCTATATCAACATGGTTTGTGATACACTGAGAAATTCCGTACCGAAGGCTGTGGTTTATTGTCAAGTAAGAGAGGCTAAGAGATCATTGCTTAACCACTTTTATGTTCAAGTTGGGAAGAAAGAGAAGGAGCAATTGGGCGCCATGTTGGATGAAGACCCAGCGCTTATGGAAAGGAGGACACAAATAGCTAAGAGGCTTGAATTGTACAAGCAAGCGAGGGATGACATTGATTCTGTAGCTTGGAAATGA 1827 0.4242 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDPGQQEYAEFLHAPRKRFTDFAAVRKEIADETDRITGKTKQISNIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPNSIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPLDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIDGSINYFKGPAEATVDAVHFVLKELVRKSIAETEELRRFPTLQSDIAAAANEALERFREESRKTVVRLVDMESSYLTVEFFRKINLEPEKNPNRNGQDSYTDNHLRKIGSNVSSYINMVCDTLRNSVPKAVVYCQVREAKRSLLNHFYVQVGKKEKEQLGAMLDEDPALMERRTQIAKRLELYKQARDDIDSVAWK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2250 608 Gene3D - 4 310 IPR027417 -
Dere09g2250 608 SMART GED_2 512 605 IPR003130 GO:0003924|GO:0005525
Dere09g2250 608 Pfam Dynamin central region 222 489 IPR000375 -
Dere09g2250 608 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Dere09g2250 608 Pfam Dynamin GTPase effector domain 513 605 IPR003130 GO:0003924|GO:0005525
Dere09g2250 608 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Dere09g2250 608 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Dere09g2250 608 PRINTS Dynamin signature 133 150 IPR022812 -
Dere09g2250 608 PRINTS Dynamin signature 202 218 IPR022812 -
Dere09g2250 608 PRINTS Dynamin signature 183 201 IPR022812 -
Dere09g2250 608 PRINTS Dynamin signature 35 53 IPR022812 -
Dere09g2250 608 PRINTS Dynamin signature 60 77 IPR022812 -
Dere09g2250 608 PRINTS Dynamin signature 225 244 IPR022812 -
Dere09g2250 608 FunFam Dynamin-related protein 1C 332 585 - -
Dere09g2250 608 FunFam dynamin-related protein 1E 4 310 - -
Dere09g2250 608 Gene3D Dynamin, middle domain 327 571 - -
Dere09g2250 608 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Dere09g2250 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Dere09g2250 608 ProSiteProfiles GED domain profile. 517 608 IPR020850 -
Dere09g2250 608 PANTHER DYNAMIN 6 605 IPR022812 -
Dere09g2250 608 Pfam Dynamin family 38 213 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2250 Dere-ChrDere09 32924644 32936019 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2250 09 32924644 32936019 Dere09g2250 09 32924644 32936019 ECH