Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2163 ATGATTACTTGGAAAGATCTATACACCGTTTTGTCGGCGGTGGTTCCTCTGTACGTGGCCATGATCTTAGCTTACGGCTCCGTCCGTTGGTGGAAGATATTCTCGCCTGACCAGTGCTCCGGCATCAACCGGTTCGTCGCGATCTTCGCGGTCCCTCTTCTCTCCTTCCATTTCATCTCCTCCAACAACCCTTACGCCATGGACATGCGCTTCATCGCCGCCGATACCCTCCAGAAGATCATCATGCTCATCGCGCTCAGTATCTGGACCAACTTCACCAAGAACGGAAGCCTCGAATGGATGATCACCATCTTCTCGCTGTCCACATTGCCCAACACTCTAGTCATGGGGATTCCGCTGCTGATCGCCATGTATGGAGAGTACTCCGGCAAGCTCATGGTTCAGGTGGTGGTGTTACAGTGCATCATCTGGTACACACTCTTGCTGTTTCTCTTCGAGTACCGCGGCGCCAAGCTGCTGATCATGGAGCAGTTCCCGGAGACGGCGGCGTCCATCGTGTCGTTCAAGGTCGACTCCGACGTCGTCTCGCTTGATGGCCGGGACTTCCTCGAGACCGATGCTGAGGTCGGAGACGACGGGAAGCTTCACGTGACGGTGAGAAAGTCGAACGCGTCGAGGAGGTCGTTCATGATGACTCCCCGTCCGTCGAACCTCACCGGAGCCGAGATTTACAGCCTGAGCTCTTCCCGAAATCCGACGCCGAGAGGGTCCAATTTCAACCACGCAGATTTCTACTCAATGATGGGGTACACTGCGGGGCCGAGGCATTCGAACTTCACCGGCACGGCGGAGCTGTACTCCGTTAATCAGTCGTCGTCGAGACCGTCGAATTTCGAAGAGAATAACACTGTTCCAATGGCTGCTCAGGCTATGAACTCTCCCCGATTCGGATTCTACCCGGCACAACAGGCATCATCGTACCCAGCTCCGAATCCAGAATTCTCATCATCGAATTTGAGCTCCAAAAGTGTTAAACAGCAAAATCCAGCTCAACCTCCGAACAATAGTACTAAAGCGAGTCATGATGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCTAGCGCATCGCCGGTGTCAGAACGTGGCGGCAGCGGCGGGCTGCACGCACTTACCGGAGGCTCCGATGACCAAGCCGGACGATCAAATCGGGGGGCCAAAGAGATTCGGATGCTGGTCGCCGATGATCATCATCACCCTCAAAATGGGGAATCCAACAAAGATAATCCAGATCCAGAGTTTGGAGAAGAGTTCAAGCTTATGGAGAAGGGAGGAGAAGAACAAGCAGTGGCAGCAGCAGCAGCAGCAGCAGAGGAAGAAGAGAGAGAGAAAGAGGGGCCCACCGGACTGAACAAGCTAGGGTCCAGTTCCACGGCAGAGCTACACCCGAAAGGCGGCGGAGGGGCGGAGTCCGGCGTCGGAAAACAAATGCCGCCGGCGAGTGTCATAACCCGTCTGATTCTGATCATGGTGTGGCGGAAGCTTATCCGCAACCCCAACACATACTCAAGCCTCATTGGTGTTATTTGGTCCCTCGTTGCCTACCGGTGGCACGTGGAAATGCCGAAAATTATTGAGAAGTCAATCTCCATACTGTCCGATGCTGGGCTTGGAATGGCTATGTTCAGTTTAGGTCTGTTCATGGCCCTTCAACCCAAGATCATTGCATGTGGGAATTCCGTCGCTTCCTTTGCCATGGCTATTCGGTTCCTGACCGGTCCGGCCGTGATGGCGGCGGCTTCCATTGCCGTTGGCCTCCGTGGTACCCTCCTACGTGTAGCCATTGTTCAGGCTGCACTTCCACAAGGTATAGTTCCATTTGTGTTTGCCAAAGAGTACAACGTCCATCCAGCAATTCTCAGCACAGCGGTTATATTTGGGATGCTAATAGCACTACCAATTACTCTAGTCTACTACATTCTTCTTGGCCTGTAG 1953 0.5361 MITWKDLYTVLSAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMDMRFIAADTLQKIIMLIALSIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGKLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYTAGPRHSNFTGTAELYSVNQSSSRPSNFEENNTVPMAAQAMNSPRFGFYPAQQASSYPAPNPEFSSSNLSSKSVKQQNPAQPPNNSTKASHDAKELHMFVWSSSASPVSERGGSGGLHALTGGSDDQAGRSNRGAKEIRMLVADDHHHPQNGESNKDNPDPEFGEEFKLMEKGGEEQAVAAAAAAAEEEEREKEGPTGLNKLGSSSTAELHPKGGGGAESGVGKQMPPASVITRLILIMVWRKLIRNPNTYSSLIGVIWSLVAYRWHVEMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAIRFLTGPAVMAAASIAVGLRGTLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2163 650 MobiDBLite consensus disorder prediction 401 481 - -
Dere09g2163 650 Pfam Membrane transport protein 9 645 IPR004776 GO:0016020|GO:0055085
Dere09g2163 650 MobiDBLite consensus disorder prediction 309 346 - -
Dere09g2163 650 MobiDBLite consensus disorder prediction 309 389 - -
Dere09g2163 650 MobiDBLite consensus disorder prediction 401 430 - -
Dere09g2163 650 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 650 - -
Dere09g2163 650 NCBIfam auxin efflux carrier 1 650 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2163 Dere-ChrDere09 30862367 30865838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2163 1 650 Organic Solute Cotransporters AT1G70940 74.063 0.0 927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2163 09 30862367 30865838 Dere09g2163 09 30862367 30865838 ECH