Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2142 ATGACTAAAGAAGAAGACTTTAAGCTCCTAAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAGCTCCTTCAGAGGATTGAAGGTGTTTATCAAGTTCAAATAGATGCAGAACAGCAGAAAGTGACAGTTTCTGGCTGTGTCGATTCTGCGACCTTGATCAAGAAACTGGTGAGAGCTGGTAAGTACGCTGAGCTTTGGTCACAGAAGACAAATCAGAACCAAAAGCAGAACAACGTCAACAACAACAACTGTATGAAAAACGACAAGAATCAAAACGGGCAAAAGCAAGGACTGGTTAATAAGGGGCTTGAGGCCTTTAAAAGCCAGCAGAAATTCAAATTCCCTGCTTTCAGCTCTGAAGAAGATGATGAATACTACGATGATGATGATGAAGACGAAGACTTTGAAGATGATGATGGGCTAAGGTTCATCAGGGAGAAAGCTAACAATCAACTGAATTTGCTCAGAGAGCAGCAGCAGCAAGCAGCTAGTACTGCAAGCAATGCGAAGAAAAATGCTGGAGCCATGAATTCAGTTGCTAATGGCAAGGCAAGCAATAATAATGCCAATGGTAGCAGGAAAGGAGGTTTTAATCAGAATATGGGAATGAAGGGCATTGATCCTAAAACAATGGCTGCTCTGAAAATGAACAACAATGCCCATTTGGGTAGTGAAAGTCTCAATCTTGGAGAACCCAGAAGGGTCCCAAATGACATAGGTTCTATGATGAGTCTTGCTGGTTTTAATGGAAATAACAATGCTAATGTTGGCTTGGGAGGTTATCAAGTTCAGCCCAACCATGGATTTCAAGGACCCTCTTCAGGAGTCATCCCAAATGCTACTGGTTTTGTCACAAACCAACAGTACCCATCACCATCACCATCTTCATCATCTTTTCTGATGAACATGAATGGGTTTAACAGTCATCCAGCTTCAATGATGATGAACATGAGACAACAACCTCAGATGATGTATCAGAGAGCTCCATTTGTTCCTCCTAGCACTGGCTATTACTACAACAACAACAACTATAATTACAGTCCTGCCCTTGCCAATTACTCCCATCATCATCAGTTGCCTAATTACTCTGGGGGAGATCACCATGCAGCTGATATGTTCAGTGATGACAACGCTAACAGCAGCTGTTCAGTTATGTAA 1191 0.419 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGCVDSATLIKKLVRAGKYAELWSQKTNQNQKQNNVNNNNCMKNDKNQNGQKQGLVNKGLEAFKSQQKFKFPAFSSEEDDEYYDDDDEDEDFEDDDGLRFIREKANNQLNLLREQQQQAASTASNAKKNAGAMNSVANGKASNNNANGSRKGGFNQNMGMKGIDPKTMAALKMNNNAHLGSESLNLGEPRRVPNDIGSMMSLAGFNGNNNANVGLGGYQVQPNHGFQGPSSGVIPNATGFVTNQQYPSPSPSSSSFLMNMNGFNSHPASMMMNMRQQPQMMYQRAPFVPPSTGYYYNNNNYNYSPALANYSHHHQLPNYSGGDHHAADMFSDDNANSSCSVM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2142 396 MobiDBLite consensus disorder prediction 128 147 - -
Dere09g2142 396 MobiDBLite consensus disorder prediction 189 211 - -
Dere09g2142 396 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Dere09g2142 396 MobiDBLite consensus disorder prediction 81 106 - -
Dere09g2142 396 MobiDBLite consensus disorder prediction 132 147 - -
Dere09g2142 396 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Dere09g2142 396 Gene3D - 12 84 - -
Dere09g2142 396 CDD HMA 16 75 IPR006121 GO:0046872
Dere09g2142 396 Coils Coil 152 183 - -
Dere09g2142 396 MobiDBLite consensus disorder prediction 189 208 - -
Dere09g2142 396 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Dere09g2142 396 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2142 Dere-ChrDere09 30432944 30434831 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2142 09 30432944 30434831 Dere09g2142 09 30432944 30434831 ECH