Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2121 ATGAACACAGTGTTCGCTTCCTTCGCCGTTGTCACTGAGATGAGCAACCCAGCTGAGGAAGACTTGTTAGCGAGAGCTGCAAAACTAGCCGAAGATCTTTACCTCCTCCGAGACACTTATTTCCCGGAGAATCCAGATGACAAGTGCTCCAAATTGCAAGAGGAATCCGATCTTGCTCTGAAACTCCTCGATTCTATTCCTCCAGAACAAAGAAAGTCACCCTTGCAACGTGCGACATTTGAATATCTGAGAGGGAAGATTTTGGATGTATGTCCTGACTATAAGAAGGAAGCAGAGGATCACCTTTCAAAATCTGTTAAGTTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGTAACTGCATTTGGAAGAAAGGAGATCTATCTGCTGCAAAAAACTGCCTCAGTCTTGCATTAAGCAAGGGTCCTAATAAGAAGATTCTTTGTCAGTTATCAATGCTTAAAAGAAAAATGTCACAAGGTGCTGAGAATCAGGCAGAACTTGTTGAGGAAAGCATTCAACATGCCAAAGAAGCTATCACTTTGGATGTCAAGGATGGGAATTCTTGGTATAATCTTGGAAATGCGTGCCTCACAAGTTTTTTTGTATCTGGAGCTTGGGATCATAGCAAACTTTTACATTCTTTGAAAGCATATCAAAATGCTGTGAAAGATGAAAGAATGAAGTCCAATCCAGATCTATATTTTAATAGTGCCACTGTTAACAAATATCTAGAGAATTATGAGAGGGCCCTTAGTGGCTTTGAGGCTGCTGCTATAAGGGATCCAGGTCTGAATGCAGGTGCCGAGGTTCAGAAGATAGTCAACCTACTTGACAAGTTAGAGAATCTTATGAGGGGACATGTAAAAGCCAAGCGAATATCAAGTCTGGCCTCATCTTTGGCTGCTCTTAATTTGAATTCATCATTCAAAAGAACTACTATAGACCATACGTTGGAGGGTCTAAACAGAGACGTAGCAGTTGACGGGAAGGTATTATTCTTTGTTAAGAGTGACATTGTTGCTCCACTATACTATTTGCTTTGTGATTCAAACCAAACTTGCTTTGTTCTTTCAGTTTACGGTGTACATAGCAATGTGATCAAAGAAGGAGATCAGCTAACGTTGCTTGAACCATACTTCCATTTTGTTGATTTTTCATGGAAAGGGAAGCATTACCAGTTCAAGTCAATACGTGTGGACTTCCCTGAACAAATGCTTGTGAATGGAAAAGCTGTGACGCCTCAACAAGCTGTTCGGACATCAATATATGCACAACATAAACCATGA 1293 0.4076 MNTVFASFAVVTEMSNPAEEDLLARAAKLAEDLYLLRDTYFPENPDDKCSKLQEESDLALKLLDSIPPEQRKSPLQRATFEYLRGKILDVCPDYKKEAEDHLSKSVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLSLALSKGPNKKILCQLSMLKRKMSQGAENQAELVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVSGAWDHSKLLHSLKAYQNAVKDERMKSNPDLYFNSATVNKYLENYERALSGFEAAAIRDPGLNAGAEVQKIVNLLDKLENLMRGHVKAKRISSLASSLAALNLNSSFKRTTIDHTLEGLNRDVAVDGKVLFFVKSDIVAPLYYLLCDSNQTCFVLSVYGVHSNVIKEGDQLTLLEPYFHFVDFSWKGKHYQFKSIRVDFPEQMLVNGKAVTPQQAVRTSIYAQHKP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2121 430 Gene3D Tetratricopeptide repeat domain 16 289 IPR011990 GO:0005515
Dere09g2121 430 Coils Coil 160 180 - -
Dere09g2121 430 Pfam Tetratricopeptide repeat protein 5 OB fold domain 311 422 IPR032076 -
Dere09g2121 430 SUPERFAMILY TPR-like 83 257 IPR011990 GO:0005515
Dere09g2121 430 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 31 407 - -
Dere09g2121 430 SMART tpr_5 113 146 IPR019734 GO:0005515
Dere09g2121 430 SMART tpr_5 233 266 IPR019734 GO:0005515
Dere09g2121 430 Gene3D - 290 429 IPR038645 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2121 09 29956815 29968850 Dere09g2121 09 29956815 29968850 ECH