Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2116 ATGTGTCAGGATTTTCCTTTTCCATTTCCAATTCCAATCTTGTTGCCAAATGTGAAAATGAAACAGAGCCATCTACACCCCCTTTTCGGCACTCTGTCTTCTCGTGGGCGCATTTCATTACAATCCGCCATATTATGTCACCTGCTTCCGTCCACCTTAGTCGGCGGCTGTTCCTCCTCTGACCAAAGTCTCGCACATTCATATAAACTCCATACAAAGTCGGAAATCACTATGCTACTCTCTCTCTCACCACCAGTTCCTTCTTCCTCTTCCCTCAGCCCCCATGCGCACTTTAGCCCATTCCTCCCTCCCATGTCTATTCTACGCCGGCTGACCCTCCCCCTTCCCCGCCACCTAAGCCTCCGCCACCATCGCTTGGCCACCGTCGCTGCCGCCGCCGTACGACAGGACACCACCGTCTGGACCACAGCCCCGCTCTCCGAGATCGAACCCGCCGCCGAGTCCCTCTTCCACGTCACTGTCGACTTGTCCGACTCGCCTGACCTGGCCGCCTCTCATACTCGCGCCGGGCAGTACCTCCAATTGCGAGTCCCCGACGTCTCCAAGCCTTCCTTCCTGGCCATCGCGTCGCCTCCGAAGCTCGCTTCGGCGTATGGCGTGTTCGAGTTCCTTGTGAAGAGCTTGGCGGGGTCTACTGCTGAGATCCTCTGCGGTTTGAAGAAAGGGACTGTGGTGGAGCTGAGTCAGGTTATGGGAAATGGGTTCGATACGAGTCGGATCGATCCGCCAGAGAAATATAGTACGGTTCTGATTTTTGCCACTGGATCCGGAATCAGTCCAATTCGATCACTCATTGAGTCTGGATTTAGTGCTGGCAAGCGATCTGATGTGAGGCTTTATTATGGGGCTAGAAACCTTGAAAGAATGGCTTATCAGGATAGATTCAAAGACTGGGAATCTTCCGGTGTTAAAATTGTGCCTGTGTTATCTCAACCAGATGATAGTTGGACTGGGGAAACTGGCTATGTGCAGGCTGCTTTTGCAAGAACCAAGCAAATTTCTAACCCTTTGTCTACTGGTGCTGTACTTTGTGGGCAGAAACAGATGGCAGAGGAAGTTACATCCCTTCTTGTTGCTGATGGAGTCTCAAGTGAGAAGATATTGAAGAATTTCTGA 1137 0.5189 MCQDFPFPFPIPILLPNVKMKQSHLHPLFGTLSSRGRISLQSAILCHLLPSTLVGGCSSSDQSLAHSYKLHTKSEITMLLSLSPPVPSSSSLSPHAHFSPFLPPMSILRRLTLPLPRHLSLRHHRLATVAAAAVRQDTTVWTTAPLSEIEPAAESLFHVTVDLSDSPDLAASHTRAGQYLQLRVPDVSKPSFLAIASPPKLASAYGVFEFLVKSLAGSTAEILCGLKKGTVVELSQVMGNGFDTSRIDPPEKYSTVLIFATGSGISPIRSLIESGFSAGKRSDVRLYYGARNLERMAYQDRFKDWESSGVKIVPVLSQPDDSWTGETGYVQAAFARTKQISNPLSTGAVLCGQKQMAEEVTSLLVADGVSSEKILKNF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2116 378 Pfam Oxidoreductase NAD-binding domain 260 360 IPR001433 GO:0016491
Dere09g2116 378 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 249 375 IPR039261 -
Dere09g2116 378 Gene3D - 251 378 IPR039261 -
Dere09g2116 378 CDD FNR_like 147 375 - -
Dere09g2116 378 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 139 244 IPR017927 GO:0016491
Dere09g2116 378 PANTHER - 90 378 - -
Dere09g2116 378 SUPERFAMILY Riboflavin synthase domain-like 137 242 IPR017938 -
Dere09g2116 378 Gene3D Translation factors 133 239 - -
Dere09g2116 378 PRINTS Phenol hydroxylase reductase family signature 282 291 - -
Dere09g2116 378 PRINTS Phenol hydroxylase reductase family signature 257 276 - -
Dere09g2116 378 PRINTS Phenol hydroxylase reductase family signature 174 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2116 Dere-ChrDere09 29873676 29882594 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2116 09 29873676 29882594 Dere09g2116 09 29873676 29882594 ECH